BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027403
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   100   7e-19
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                  100   9e-19
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      99   2e-18
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                 98   3e-18
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...    98   3e-18

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  100 bits (248), Expect = 7e-19
 Identities = 49/117 (41%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
 Frame = -1

Query: 963  RAIYFNEQA-NEKGIRTNLDLAEEIRSQAAKKMEAYKDKTVEYFSKKVKPRQYAKGDLVL 787
            R++  N+   N++ +  NLD  EE R QA  +++ Y+    ++++KKVK R +A+GDLVL
Sbjct: 1670 RSMLINDPTLNDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVL 1729

Query: 786  RAT-EVSDPTNQGKLSPNWEGPYKIAEVVRPGTYKLETADGQPIPNTWHGLRLRKFY 619
            R   E +   + GKL  +WEGPY I++VV+PG Y+L T DG PIP +W+   L+++Y
Sbjct: 1730 RKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 51/117 (43%), Positives = 72/117 (61%)
 Frame = -1

Query: 969  SYRAIYFNEQANEKGIRTNLDLAEEIRSQAAKKMEAYKDKTVEYFSKKVKPRQYAKGDLV 790
            S R  +F+E    +    ++D  EE R+QA  +   Y+     Y S+KV+PR  A GDLV
Sbjct: 1982 SARTDHFDETDQNERRLDDVDFLEERRNQALVRSAVYQQAMRRYHSRKVQPRSLAVGDLV 2041

Query: 789  LRATEVSDPTNQGKLSPNWEGPYKIAEVVRPGTYKLETADGQPIPNTWHGLRLRKFY 619
            LR  ++   TN+ KLSP WEGPY + EV RPG+ +L  +DGQ + N+W+  +LRKFY
Sbjct: 2042 LR--KIQSQTNRNKLSPKWEGPYTVVEVTRPGSVRLAMSDGQILSNSWNIDQLRKFY 2096


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = -1

Query: 972  PSYRAIYFNEQANEKGIRTNLDLAEEIRSQAAKKMEAYKDKTVEYFSKKVKPRQYAKGDL 793
            P++R   FN   NE+G++ +LDL EE R  A   +  Y+++    ++ +V  R    GDL
Sbjct: 1188 PTFRTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNRMRRAYNHRVHKRDLRVGDL 1247

Query: 792  VLRATEVSDPTN-QGKLSPNWEGPYKIAEVVRPGTYKLETADGQPIPNTWHGLRLRKFY 619
            VLR +  ++  N  GK++ NWEGPYK+ E +RPGTY+L   +G P+ + W+   LRK++
Sbjct: 1248 VLRKSTATNKGNIHGKMTTNWEGPYKVVEEMRPGTYRLTDMEGVPLMSHWNTDNLRKYF 1306


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 48/119 (40%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
 Frame = -1

Query: 972  PSYRAIYFNEQANEKGIRTNLDLAEEIRSQAAKKMEAYKDKTVEYFSKKVKPRQYAKGDL 793
            PS+R  +++ + NE+ +R  LD   E+R QAA K+ A K++    ++++V+ R   +GDL
Sbjct: 645  PSFRVQHYDPEVNEQLMREALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRHRPLTEGDL 704

Query: 792  VLRATEVSDPTN-QGKLSPNWEGPYKIAEVVRPGTYKLETADGQPIPNTWHGLRLRKFY 619
            VLR T      N  GK + NWEGPY+I E V PG+YKL T +G+P+ N+++   L+K++
Sbjct: 705  VLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNADVLKKYF 763


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
            gi|323435157|ref|YP_004222375.1| hypothetical protein
            BevumaM_p142 [Beta vulgaris subsp. maritima]
            gi|346683249|ref|YP_004842181.1| hypothetical protein
            BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
            orf764 [Beta vulgaris subsp. vulgaris]
            gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
            hypothetical protein [Beta vulgaris subsp. maritima]
            gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
            hypothetical protein [Beta macrocarpa]
            gi|384977907|emb|CBL54131.1| hypothetical protein
            (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 48/119 (40%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
 Frame = -1

Query: 972  PSYRAIYFNEQANEKGIRTNLDLAEEIRSQAAKKMEAYKDKTVEYFSKKVKPRQYAKGDL 793
            PS+R  +++ + NE+ +R  LD   E+R QAA K+ A K++    ++++V+ R   +GDL
Sbjct: 645  PSFRVQHYDPEVNEQLMREALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRHRPLTEGDL 704

Query: 792  VLRATEVSDPTN-QGKLSPNWEGPYKIAEVVRPGTYKLETADGQPIPNTWHGLRLRKFY 619
            VLR T      N  GK + NWEGPY+I E V PG+YKL T +G+P+ N+++   L+K++
Sbjct: 705  VLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNADVLKKYF 763