BLASTX nr result

ID: Bupleurum21_contig00027252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027252
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167947.1| PREDICTED: chaperone protein ClpB4, mitochon...    77   7e-12
ref|XP_004145506.1| PREDICTED: chaperone protein ClpB4, mitochon...    77   7e-12
ref|XP_003603307.1| Chaperone protein clpB [Medicago truncatula]...    77   8e-12
ref|XP_003522428.1| PREDICTED: chaperone protein ClpB4, mitochon...    75   2e-11
ref|XP_002282880.1| PREDICTED: chaperone protein ClpB4, mitochon...    72   2e-10

>ref|XP_004167947.1| PREDICTED: chaperone protein ClpB4, mitochondrial-like [Cucumis
           sativus]
          Length = 983

 Score = 77.0 bits (188), Expect(2) = 7e-12
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = +2

Query: 38  VLLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196
           ++L NAR HKK+M DDF+SVEH +LAF SDKRFGQ LF+NLQL+EK LK AV+
Sbjct: 181 LILDNARKHKKEMGDDFLSVEHFVLAFHSDKRFGQQLFKNLQLSEKDLKDAVQ 233



 Score = 20.4 bits (41), Expect(2) = 7e-12
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 241 VRGNQRVTN 267
           VRGNQRVT+
Sbjct: 235 VRGNQRVTD 243


>ref|XP_004145506.1| PREDICTED: chaperone protein ClpB4, mitochondrial-like [Cucumis
           sativus]
          Length = 983

 Score = 77.0 bits (188), Expect(2) = 7e-12
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = +2

Query: 38  VLLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196
           ++L NAR HKK+M DDF+SVEH +LAF SDKRFGQ LF+NLQL+EK LK AV+
Sbjct: 181 LILDNARKHKKEMGDDFLSVEHFVLAFHSDKRFGQQLFKNLQLSEKDLKDAVQ 233



 Score = 20.4 bits (41), Expect(2) = 7e-12
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 241 VRGNQRVTN 267
           VRGNQRVT+
Sbjct: 235 VRGNQRVTD 243


>ref|XP_003603307.1| Chaperone protein clpB [Medicago truncatula]
           gi|355492355|gb|AES73558.1| Chaperone protein clpB
           [Medicago truncatula]
          Length = 980

 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = +2

Query: 41  LLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196
           +L N+  HKK+M D++VSVEHLLLAF SDKRFGQ LF+NLQL+EKTLK AV+
Sbjct: 180 ILDNSHRHKKEMGDEYVSVEHLLLAFHSDKRFGQQLFKNLQLSEKTLKDAVQ 231


>ref|XP_003522428.1| PREDICTED: chaperone protein ClpB4, mitochondrial-like [Glycine
           max]
          Length = 974

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = +2

Query: 41  LLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196
           LL N+R +KK+M D++VSVEHLLLAF SDKRFGQ LF+NLQL+EK LK AV+
Sbjct: 174 LLDNSRKYKKEMGDEYVSVEHLLLAFHSDKRFGQQLFKNLQLSEKALKDAVQ 225


>ref|XP_002282880.1| PREDICTED: chaperone protein ClpB4, mitochondrial [Vitis vinifera]
           gi|296082076|emb|CBI21081.3| unnamed protein product
           [Vitis vinifera]
          Length = 962

 Score = 72.4 bits (176), Expect(2) = 2e-10
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +2

Query: 41  LLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAV 193
           LL  AR HKK+M D+F+SVEHLLL FLSD RFG+ LF+NLQL+EK LK AV
Sbjct: 167 LLEKARRHKKEMGDNFLSVEHLLLGFLSDARFGRQLFQNLQLSEKDLKDAV 217



 Score = 20.4 bits (41), Expect(2) = 2e-10
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 241 VRGNQRVTN 267
           VRGNQRVT+
Sbjct: 220 VRGNQRVTD 228


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