BLASTX nr result
ID: Bupleurum21_contig00027252
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00027252 (1116 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004167947.1| PREDICTED: chaperone protein ClpB4, mitochon... 77 7e-12 ref|XP_004145506.1| PREDICTED: chaperone protein ClpB4, mitochon... 77 7e-12 ref|XP_003603307.1| Chaperone protein clpB [Medicago truncatula]... 77 8e-12 ref|XP_003522428.1| PREDICTED: chaperone protein ClpB4, mitochon... 75 2e-11 ref|XP_002282880.1| PREDICTED: chaperone protein ClpB4, mitochon... 72 2e-10 >ref|XP_004167947.1| PREDICTED: chaperone protein ClpB4, mitochondrial-like [Cucumis sativus] Length = 983 Score = 77.0 bits (188), Expect(2) = 7e-12 Identities = 37/53 (69%), Positives = 45/53 (84%) Frame = +2 Query: 38 VLLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196 ++L NAR HKK+M DDF+SVEH +LAF SDKRFGQ LF+NLQL+EK LK AV+ Sbjct: 181 LILDNARKHKKEMGDDFLSVEHFVLAFHSDKRFGQQLFKNLQLSEKDLKDAVQ 233 Score = 20.4 bits (41), Expect(2) = 7e-12 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = +1 Query: 241 VRGNQRVTN 267 VRGNQRVT+ Sbjct: 235 VRGNQRVTD 243 >ref|XP_004145506.1| PREDICTED: chaperone protein ClpB4, mitochondrial-like [Cucumis sativus] Length = 983 Score = 77.0 bits (188), Expect(2) = 7e-12 Identities = 37/53 (69%), Positives = 45/53 (84%) Frame = +2 Query: 38 VLLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196 ++L NAR HKK+M DDF+SVEH +LAF SDKRFGQ LF+NLQL+EK LK AV+ Sbjct: 181 LILDNARKHKKEMGDDFLSVEHFVLAFHSDKRFGQQLFKNLQLSEKDLKDAVQ 233 Score = 20.4 bits (41), Expect(2) = 7e-12 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = +1 Query: 241 VRGNQRVTN 267 VRGNQRVT+ Sbjct: 235 VRGNQRVTD 243 >ref|XP_003603307.1| Chaperone protein clpB [Medicago truncatula] gi|355492355|gb|AES73558.1| Chaperone protein clpB [Medicago truncatula] Length = 980 Score = 77.0 bits (188), Expect = 8e-12 Identities = 37/52 (71%), Positives = 45/52 (86%) Frame = +2 Query: 41 LLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196 +L N+ HKK+M D++VSVEHLLLAF SDKRFGQ LF+NLQL+EKTLK AV+ Sbjct: 180 ILDNSHRHKKEMGDEYVSVEHLLLAFHSDKRFGQQLFKNLQLSEKTLKDAVQ 231 >ref|XP_003522428.1| PREDICTED: chaperone protein ClpB4, mitochondrial-like [Glycine max] Length = 974 Score = 75.5 bits (184), Expect = 2e-11 Identities = 37/52 (71%), Positives = 45/52 (86%) Frame = +2 Query: 41 LLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAVK 196 LL N+R +KK+M D++VSVEHLLLAF SDKRFGQ LF+NLQL+EK LK AV+ Sbjct: 174 LLDNSRKYKKEMGDEYVSVEHLLLAFHSDKRFGQQLFKNLQLSEKALKDAVQ 225 >ref|XP_002282880.1| PREDICTED: chaperone protein ClpB4, mitochondrial [Vitis vinifera] gi|296082076|emb|CBI21081.3| unnamed protein product [Vitis vinifera] Length = 962 Score = 72.4 bits (176), Expect(2) = 2e-10 Identities = 36/51 (70%), Positives = 42/51 (82%) Frame = +2 Query: 41 LLSNARNHKKDMKDDFVSVEHLLLAFLSDKRFGQLLFRNLQLAEKTLKVAV 193 LL AR HKK+M D+F+SVEHLLL FLSD RFG+ LF+NLQL+EK LK AV Sbjct: 167 LLEKARRHKKEMGDNFLSVEHLLLGFLSDARFGRQLFQNLQLSEKDLKDAV 217 Score = 20.4 bits (41), Expect(2) = 2e-10 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = +1 Query: 241 VRGNQRVTN 267 VRGNQRVT+ Sbjct: 220 VRGNQRVTD 228