BLASTX nr result

ID: Bupleurum21_contig00026612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026612
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313836.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_002281840.1| PREDICTED: armadillo repeat-containing prote...   167   8e-40
emb|CAN81421.1| hypothetical protein VITISV_035941 [Vitis vinifera]   167   8e-40
gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK...   166   2e-39

>ref|XP_002313836.1| predicted protein [Populus trichocarpa] gi|222850244|gb|EEE87791.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/126 (71%), Positives = 106/126 (84%)
 Frame = -1

Query: 378 LLIHDLQCTETFRNCNGPKVVVQILNEGTDNVTLLSSGFSVVAAAATGNEVVKELFMDLK 199
           LLIHD+Q TETFR+ +GPK+VV IL +G++++ +L+SGF+VVAAAAT NEVVKELFM+LK
Sbjct: 143 LLIHDVQSTETFRSSDGPKMVVDILKDGSESLDILNSGFAVVAAAATSNEVVKELFMELK 202

Query: 198 IDELIISVLRIQKNENISSLYDVVRVLLTPDDNRVVASQVYGYARRFAKIGIAEALVHSL 19
           IDELI+  L  Q   NI  LYD +RVLLTPDDNRVVASQVYGYARRFAKIGIA ALV SL
Sbjct: 203 IDELILEALNRQSKGNIRGLYDSIRVLLTPDDNRVVASQVYGYARRFAKIGIARALVESL 262

Query: 18  RDGIRS 1
           R G+ S
Sbjct: 263 RAGLTS 268


>ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|222871351|gb|EEF08482.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/126 (69%), Positives = 104/126 (82%)
 Frame = -1

Query: 378 LLIHDLQCTETFRNCNGPKVVVQILNEGTDNVTLLSSGFSVVAAAATGNEVVKELFMDLK 199
           LLIHD+Q TE FR+ +GPK+VV IL  G++++ +L++GF+VVAAAATGNEVVKEL ++LK
Sbjct: 143 LLIHDVQSTEMFRSSDGPKMVVGILKGGSESLEVLNTGFAVVAAAATGNEVVKELLIELK 202

Query: 198 IDELIISVLRIQKNENISSLYDVVRVLLTPDDNRVVASQVYGYARRFAKIGIAEALVHSL 19
           IDELI+ VL  Q    I  LYD +RVLLTPDDNRVVASQVYGYARRFAKIGIA ALV SL
Sbjct: 203 IDELILEVLNRQSKGIIQGLYDSIRVLLTPDDNRVVASQVYGYARRFAKIGIARALVESL 262

Query: 18  RDGIRS 1
           R G+ S
Sbjct: 263 RSGLTS 268


>ref|XP_002281840.1| PREDICTED: armadillo repeat-containing protein 6 [Vitis vinifera]
           gi|297741329|emb|CBI32460.3| unnamed protein product
           [Vitis vinifera]
          Length = 460

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/125 (65%), Positives = 102/125 (81%)
 Frame = -1

Query: 375 LIHDLQCTETFRNCNGPKVVVQILNEGTDNVTLLSSGFSVVAAAATGNEVVKELFMDLKI 196
           L+HD+Q TETF+   GPK+VV +LN+ + NV +L+SGFSVVAAAATGNE++KE FMDL+I
Sbjct: 144 LLHDVQSTETFQKIGGPKIVVGVLNDASQNVDILNSGFSVVAAAATGNEILKESFMDLQI 203

Query: 195 DELIISVLRIQKNENISSLYDVVRVLLTPDDNRVVASQVYGYARRFAKIGIAEALVHSLR 16
           DELII +++      + S+YD + VLLTPDDNRVVASQVYGYARRFAK GIA ALV SL 
Sbjct: 204 DELIIQIMKSHGRGRVHSIYDAICVLLTPDDNRVVASQVYGYARRFAKAGIAGALVESLG 263

Query: 15  DGIRS 1
           +G+RS
Sbjct: 264 EGLRS 268


>emb|CAN81421.1| hypothetical protein VITISV_035941 [Vitis vinifera]
          Length = 449

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/125 (65%), Positives = 102/125 (81%)
 Frame = -1

Query: 375 LIHDLQCTETFRNCNGPKVVVQILNEGTDNVTLLSSGFSVVAAAATGNEVVKELFMDLKI 196
           L+HD+Q TETF+   GPK+VV +LN+ + NV +L+SGFSVVAAAATGNE++KE FMDL+I
Sbjct: 144 LLHDVQSTETFQKIGGPKIVVGVLNDASQNVDILNSGFSVVAAAATGNEILKESFMDLQI 203

Query: 195 DELIISVLRIQKNENISSLYDVVRVLLTPDDNRVVASQVYGYARRFAKIGIAEALVHSLR 16
           DELII +++      + S+YD + VLLTPDDNRVVASQVYGYARRFAK GIA ALV SL 
Sbjct: 204 DELIIQIMKSHGRGRVHSIYDAICVLLTPDDNRVVASQVYGYARRFAKAGIAGALVESLG 263

Query: 15  DGIRS 1
           +G+RS
Sbjct: 264 EGLRS 268


>gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK47554.1| unknown
           [Medicago truncatula]
          Length = 459

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/126 (60%), Positives = 103/126 (81%)
 Frame = -1

Query: 378 LLIHDLQCTETFRNCNGPKVVVQILNEGTDNVTLLSSGFSVVAAAATGNEVVKELFMDLK 199
           LL+HD+Q T TF+N NGP++++ I+N+   N+ +L+S F VVA+AATG+E+VK+ FM+LK
Sbjct: 141 LLLHDVQSTGTFQNSNGPRIIIGIINDNKQNIDVLNSSFRVVASAATGDEIVKDSFMELK 200

Query: 198 IDELIISVLRIQKNENISSLYDVVRVLLTPDDNRVVASQVYGYARRFAKIGIAEALVHSL 19
           +DELI+ ++ + KN  I SLYD +RVLLTPDDNRV+ASQVYGYAR+FAKIGI +ALV SL
Sbjct: 201 VDELIVEIMSVHKNPGIQSLYDAIRVLLTPDDNRVLASQVYGYARKFAKIGITDALVDSL 260

Query: 18  RDGIRS 1
             G+ S
Sbjct: 261 HTGLSS 266


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