BLASTX nr result

ID: Bupleurum21_contig00026570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026570
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865245.1| predicted protein [Arabidopsis lyrata subsp....    61   1e-07
ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichoca...    55   8e-06

>ref|XP_002865245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311080|gb|EFH41504.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1082

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
 Frame = +3

Query: 66  EIFGKLNDQETEKVVIFGEQGVGKTWMAKKLSDGWLRKHGEQGVVIWIFLCTKHDDRSLL 245
           EI     D    +V++ GE G+GKTWMA+K+      K G   + +W+ L    D+ SL 
Sbjct: 14  EILKSFEDDNVSRVMLVGEAGMGKTWMARKIFQEDHAKAGSCYIALWLSLNKDFDEVSLY 73

Query: 246 ESIARQMSL-------TAEDSDEWETADEREAETRGGXXXXXXXXXXXXXXXXXXXXXXX 404
           E+IA Q+S+         +DSDE ++ D+ +   R                         
Sbjct: 74  ENIASQLSIFLDKEESEEDDSDEDDSEDDEDQLNR--------------DLMSLKDKIHL 119

Query: 405 XXXXXILKTSQKKEVLLVLDDEGSKMKKGEIKSSLN 512
                 L    +K +LLVLDDEGS   + ++   L+
Sbjct: 120 KLSEIKLMGEGRKYLLLVLDDEGSVTSEKKVMKDLH 155


>ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222841801|gb|EEE79348.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1265

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = +3

Query: 66  EIFGKLNDQETEKVVIFGEQGVGKTWMAKKLSDGWLRKHGEQGVVIWIFLCTKHDDRSLL 245
           +I   L + +  ++++ G  GVGKTWMAK++ +  +    E   V+W+ +  KHD+ SL 
Sbjct: 8   KIVNWLKEDDAPRLILVGIAGVGKTWMAKRIRECAIT---EGYAVLWVSMTVKHDNMSLY 64

Query: 246 ESIARQMSL--TAEDSDEWETADERE 317
           + IA Q+SL  T E  +E +  +E+E
Sbjct: 65  KIIAHQLSLLSTIEKLEEDDIDEEKE 90


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