BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026496
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]   140   1e-31
ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat...   140   1e-31
ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   127   7e-28
ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arab...   118   6e-25
ref|NP_177580.1| pentatricopeptide repeat-containing protein [Ar...   117   1e-24

>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/114 (59%), Positives = 85/114 (74%), Gaps = 8/114 (7%)
 Frame = +2

Query: 8    QLSHYGCMVDLLCRAGLLQEAYEFVIAMPNKPNAVVWRTLLGACSAAG--------NVEL 163
            ++SH+GCMVDLLCRAGLL EAYEF++ MP +PNAVVWRTLLGACS  G        N+++
Sbjct: 901  RISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKI 960

Query: 164  AAKARNHLLRLKEGQAGDDVAMSNVYAVTEMWDKKMTIRDQTKQRRRAPGCSSV 325
             ++AR  LL L+    GD+V MSN+YA   MWDKKM +R+Q KQ RR PGCSS+
Sbjct: 961  XSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQ-RRDPGCSSI 1013


>ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74400-like [Vitis vinifera]
          Length = 482

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/114 (59%), Positives = 85/114 (74%), Gaps = 8/114 (7%)
 Frame = +2

Query: 8   QLSHYGCMVDLLCRAGLLQEAYEFVIAMPNKPNAVVWRTLLGACSAAG--------NVEL 163
           ++SH+GCMVDLLCRAGLL EAYEF++ MP +PNAVVWRTLLGACS  G        N+++
Sbjct: 323 RISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKI 382

Query: 164 AAKARNHLLRLKEGQAGDDVAMSNVYAVTEMWDKKMTIRDQTKQRRRAPGCSSV 325
            ++AR  LL L+    GD+V MSN+YA   MWDKKM +R+Q KQ RR PGCSS+
Sbjct: 383 YSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQ-RRDPGCSSI 435


>ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74400-like [Glycine max]
          Length = 333

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/105 (59%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
 Frame = +2

Query: 14  SHYGCMVDLLCRAG-LLQEAYEFVIAMPNKPNAVVWRTLLGACSAAGNVELAAKARNHLL 190
           +H+GCMVDLLCR G  L+++Y+F++ MP  PNAVVWRTLLGACS  G +ELAA+ R  LL
Sbjct: 208 AHFGCMVDLLCRVGGHLRDSYDFIMEMPVPPNAVVWRTLLGACSVRGELELAAEVRQKLL 267

Query: 191 RLKEGQAGDDVAMSNVYAVTEMWDKKMTIRDQTKQRRRAPGCSSV 325
           +L  G   D VAMSN+YA   MW+KK+ +++Q KQ  RAPGCSS+
Sbjct: 268 KLDLGYVVDSVAMSNIYANKGMWNKKIVVKNQIKQ-SRAPGCSSI 311


>ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
           lyrata] gi|297333380|gb|EFH63798.1| hypothetical protein
           ARALYDRAFT_339633 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/102 (52%), Positives = 74/102 (72%)
 Frame = +2

Query: 14  SHYGCMVDLLCRAGLLQEAYEFVIAMPNKPNAVVWRTLLGACSAAGNVELAAKARNHLLR 193
           +H+GCMVDL CR+G L++A+EF+  MP KPNAV+WRTLLGAC   GNVEL  + +  + +
Sbjct: 313 AHFGCMVDLFCRSGHLKDAHEFIKQMPIKPNAVIWRTLLGACILHGNVELGEEVQKRIFK 372

Query: 194 LKEGQAGDDVAMSNVYAVTEMWDKKMTIRDQTKQRRRAPGCS 319
           L+    GD VA+SN+YA   MWD+K  +RD+ + +RR PG S
Sbjct: 373 LERDHVGDYVALSNIYASKGMWDEKWKMRDRVR-KRRVPGKS 413


>ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g74400 gi|12324820|gb|AAG52382.1|AC011765_34
           hypothetical protein; 20273-21661 [Arabidopsis thaliana]
           gi|332197466|gb|AEE35587.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = +2

Query: 14  SHYGCMVDLLCRAGLLQEAYEFVIAMPNKPNAVVWRTLLGACSAAGNVELAAKARNHLLR 193
           +H+GCMVDL CR+G L++A+EF+  MP KPN V+WRTLLGACS  GNVEL  + +  +  
Sbjct: 313 AHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE 372

Query: 194 LKEGQAGDDVAMSNVYAVTEMWDKKMTIRDQTKQRRRAPGCS 319
           L     GD VA+SN+YA   MWD+K  +RD+ + +RR PG S
Sbjct: 373 LDRDHVGDYVALSNIYASKGMWDEKSKMRDRVR-KRRMPGKS 413