BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026482
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   162   3e-38
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|NP_671862.1| pentatricopeptide repeat-containing protein [Ar...   152   2e-35

>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  175 bits (443), Expect = 4e-42
 Identities = 83/113 (73%), Positives = 98/113 (86%)
 Frame = -1

Query: 341 HQHIARLILEQKSPSQAIQTFRWASKLPHFTHNQSTYRALVHKLCVFRCFDIVHQMLDEM 162
           HQHIA LILEQKS SQA+QTFRWAS LP+F HNQSTYRAL+HKLC FR F+ V ++LDEM
Sbjct: 94  HQHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEM 153

Query: 161 PSSIGSTPDEDILVTLVRGLGRARMIRDVIKVVDLVMKYGGSPSLKLLNTILD 3
           PSSIGS PDE I VT+VRGLGRARM+R +IKV+DL+ K+G +PSLK+ N+ILD
Sbjct: 154 PSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILD 206


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/113 (66%), Positives = 95/113 (84%)
 Frame = -1

Query: 341 HQHIARLILEQKSPSQAIQTFRWASKLPHFTHNQSTYRALVHKLCVFRCFDIVHQMLDEM 162
           HQHIA LIL+Q S ++A+QTF+WAS LP FTH+QSTYRAL+ KLC F  FD V+Q+LDEM
Sbjct: 39  HQHIAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEM 98

Query: 161 PSSIGSTPDEDILVTLVRGLGRARMIRDVIKVVDLVMKYGGSPSLKLLNTILD 3
           P +IGS PDE+I +T++RGLGRARMI  VIKV+DL+ K+G +PSLK+ N+ILD
Sbjct: 99  PHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILD 151


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  161 bits (408), Expect = 4e-38
 Identities = 77/113 (68%), Positives = 92/113 (81%)
 Frame = -1

Query: 341 HQHIARLILEQKSPSQAIQTFRWASKLPHFTHNQSTYRALVHKLCVFRCFDIVHQMLDEM 162
           H+ I  LIL+QKS  QA+QTF WASKLP+FTH+QSTYRAL+HKL  FR F  V  +LDEM
Sbjct: 15  HERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEM 74

Query: 161 PSSIGSTPDEDILVTLVRGLGRARMIRDVIKVVDLVMKYGGSPSLKLLNTILD 3
           P SIG  PDE I +T++RGLGRARMIRDVIKV+DLV +YG +PSLK+ N+ILD
Sbjct: 75  PKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILD 127


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/112 (64%), Positives = 95/112 (84%)
 Frame = -1

Query: 338 QHIARLILEQKSPSQAIQTFRWASKLPHFTHNQSTYRALVHKLCVFRCFDIVHQMLDEMP 159
           +H+++LIL+QKS S+A++ FRWAS +P+F H+QSTYRAL+HKLC FR FD V Q+LDEMP
Sbjct: 37  EHVSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMP 96

Query: 158 SSIGSTPDEDILVTLVRGLGRARMIRDVIKVVDLVMKYGGSPSLKLLNTILD 3
            S+G+ P +DI +T++RGLGRARM R VIKV+DLV K+ GSPSLK+ N+ILD
Sbjct: 97  HSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILD 148


>ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17525, mitochondrial; Flags: Precursor
           gi|330251547|gb|AEC06641.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 626

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/111 (66%), Positives = 89/111 (80%)
 Frame = -1

Query: 335 HIARLILEQKSPSQAIQTFRWASKLPHFTHNQSTYRALVHKLCVFRCFDIVHQMLDEMPS 156
           HI RLIL+QKS S A++TFRWAS  P F H++STYRAL HKLCVFR FD V+Q+LDEMP 
Sbjct: 45  HIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPD 104

Query: 155 SIGSTPDEDILVTLVRGLGRARMIRDVIKVVDLVMKYGGSPSLKLLNTILD 3
           SIG  PD+ I VT++RG GRAR+I+ VI VVDLV K+G  PSLK+ N+ILD
Sbjct: 105 SIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILD 155