BLASTX nr result

ID: Bupleurum21_contig00026476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026476
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...   125   8e-27
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]   125   8e-27
gb|ABK95014.1| unknown [Populus trichocarpa]                          112   5e-23
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-23
ref|NP_195990.1| PAN domain-containing protein [Arabidopsis thal...   108   6e-22

>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  125 bits (313), Expect = 8e-27
 Identities = 60/107 (56%), Positives = 79/107 (73%), Gaps = 6/107 (5%)
 Frame = -1

Query: 543 INNQTEH----PCESPEDNSGDFCGLRSG--KYKVLKPTGVELPYKEEMEYQKMNSWEEC 382
           I+N TE+     C  PE  +G+ C    G  K++VL+  G+ELPYKE M Y+  +S E+C
Sbjct: 310 IDNSTEYNSEKECLPPE--TGNLCSDIEGENKFRVLRRKGIELPYKELMGYETTSSLEQC 367

Query: 381 EKSCEDKCGCWGAVYSNSSGFCYRVEYPIQTLVGVRDDTKVGYIKVR 241
           E+SCE+ C CWG+VY+N+SGFCYRV+YPI+TL+GV DDTKVGY KVR
Sbjct: 368 ERSCENNCSCWGSVYNNASGFCYRVDYPIRTLLGVGDDTKVGYFKVR 414


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score =  125 bits (313), Expect = 8e-27
 Identities = 60/107 (56%), Positives = 79/107 (73%), Gaps = 6/107 (5%)
 Frame = -1

Query: 543 INNQTEH----PCESPEDNSGDFCGLRSG--KYKVLKPTGVELPYKEEMEYQKMNSWEEC 382
           I+N TE+     C  PE  +G+ C    G  K++VL+  G+ELPYKE M Y+  +S E+C
Sbjct: 310 IDNSTEYNSEKECLPPE--TGNLCSDIEGENKFRVLRRKGIELPYKELMGYETTSSLEQC 367

Query: 381 EKSCEDKCGCWGAVYSNSSGFCYRVEYPIQTLVGVRDDTKVGYIKVR 241
           E+SCE+ C CWG+VY+N+SGFCYRV+YPI+TL+GV DDTKVGY KVR
Sbjct: 368 ERSCENNCSCWGSVYNNASGFCYRVDYPIRTLLGVGDDTKVGYFKVR 414


>gb|ABK95014.1| unknown [Populus trichocarpa]
          Length = 487

 Score =  112 bits (280), Expect = 5e-23
 Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = -1

Query: 519 CESPEDNSGDFCGLRSGKYKVLKPTGVELPYKEEMEYQKMNSW-EECEKSCEDKCGCWGA 343
           C   +D SGDFC   S  + VL+  GVELP+KE M+    +S  EECE SC+  C CWGA
Sbjct: 323 CIDGDDQSGDFCS-GSDDFWVLRRKGVELPFKELMDSDTTSSSVEECELSCQRNCSCWGA 381

Query: 342 VYSNSSGFCYRVEYPIQTLVGVRDDTKVGYIKVRVSAGENK 220
           VY+N++GFCY + YPIQTLVGV D++KVGY KVR     +K
Sbjct: 382 VYNNATGFCYTLNYPIQTLVGVGDESKVGYFKVRTKRSWHK 422


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = -1

Query: 519 CESPEDNSGDFCGLRSGKYKVLKPTGVELPYKEEMEYQKMNSW-EECEKSCEDKCGCWGA 343
           C   +D SGDFC   S  + VL+  GVELP+KE M+    +S  EECE SC+  C CWGA
Sbjct: 323 CIDGDDQSGDFCS-GSDDFWVLRRKGVELPFKELMDSDTTSSSVEECELSCQRNCSCWGA 381

Query: 342 VYSNSSGFCYRVEYPIQTLVGVRDDTKVGYIKVRVSAGENK 220
           VY+N++GFCY + YPIQTLVGV D++KVGY KVR     +K
Sbjct: 382 VYNNATGFCYPLNYPIQTLVGVGDESKVGYFKVRTKRSWHK 422


>ref|NP_195990.1| PAN domain-containing protein [Arabidopsis thaliana]
           gi|75181333|sp|Q9LZR8.1|Y5370_ARATH RecName: Full=PAN
           domain-containing protein At5g03700; Flags: Precursor
           gi|7340655|emb|CAB82935.1| S-receptor kinase-like
           protein [Arabidopsis thaliana]
           gi|332003261|gb|AED90644.1| PAN domain-containing
           protein [Arabidopsis thaliana]
          Length = 482

 Score =  108 bits (271), Expect = 6e-22
 Identities = 60/170 (35%), Positives = 87/170 (51%)
 Frame = -1

Query: 519 CESPEDNSGDFCGLRSGKYKVLKPTGVELPYKEEMEYQKMNSWEECEKSCEDKCGCWGAV 340
           C     +  DFC  ++ ++KV++  GVE+P+KE M+++  +S  ECE+ C D C C+GAV
Sbjct: 319 CTHAASSPADFCD-KTTEFKVVRRDGVEVPFKELMDHKTTSSLGECEEMCVDNCKCFGAV 377

Query: 339 YSNSSGFCYRVEYPIQTLVGVRDDTKVGYIKVRVSAGENKTAIXXXXXXXXXXXXXXXXX 160
           Y+N SGFCY V YPI+T++GV D +K+GY KVR   G+ K+ +                 
Sbjct: 378 YNNGSGFCYLVNYPIRTMLGVADPSKLGYFKVREGVGKKKSRV-----GLTVGMSLLAVI 432

Query: 159 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPYKDLASSSFGSVELSQR 10
                                          GPYK+L S SF SVE+S+R
Sbjct: 433 ALVLMVAMVYVGFRNWRREKRVLEEDNGLSPGPYKNLGSDSFNSVEMSRR 482


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