BLASTX nr result

ID: Bupleurum21_contig00026475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026475
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   127   1e-27
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002512603.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycin...   114   1e-23
ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cuc...   113   2e-23

>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score =  127 bits (318), Expect = 1e-27
 Identities = 69/141 (48%), Positives = 82/141 (58%)
 Frame = -1

Query: 425 PRYWRWTSDSESRFRKVIELISVCWLEIHGKINTSLLSPDTVYKTYLVYKPSEMVYGFDD 246
           P YWRW SDS SRF +V ELI VCWLEI GKIN ++LSP T+Y  YLV+KP E  YG D 
Sbjct: 117 PTYWRWNSDSSSRFGEVAELIGVCWLEICGKINATMLSPATLYAAYLVFKPKEGAYGLDY 176

Query: 245 QAIEISVGLIGEESTTRTVYLDPVGGIHRRDVPAPRLMGLLHNFRSDNQERPRMHVXXXX 66
           Q +E+ VGL+G E+  R VYLD   G   R     R +GL +  R    + P        
Sbjct: 177 QPVEVGVGLVGSENGKRNVYLDSQRGRAHRYHLVRRRIGLHNRSRIVGMQEP--VPASEN 234

Query: 65  XXXXXXXRKDGWLEIELAEYF 3
                  R DGWLEIEL E+F
Sbjct: 235 NGQHPKERGDGWLEIELGEFF 255


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/141 (46%), Positives = 83/141 (58%)
 Frame = -1

Query: 425 PRYWRWTSDSESRFRKVIELISVCWLEIHGKINTSLLSPDTVYKTYLVYKPSEMVYGFDD 246
           P YW+W SD  SRF +V ELISVCWLEI GKIN ++LSP T+Y  YLV++P+  +YG D 
Sbjct: 128 PTYWKWNSDPSSRFGEVAELISVCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYGLDY 187

Query: 245 QAIEISVGLIGEESTTRTVYLDPVGGIHRRDVPAPRLMGLLHNFRSDNQERPRMHVXXXX 66
           Q +E+ VGL+G E   R VYLD   G  ++     R +GL +  R      P        
Sbjct: 188 QPVEVGVGLVGSECGMRNVYLDSERGRRQQYHFVSRRIGLFNRCRIVGM--PASEPAREN 245

Query: 65  XXXXXXXRKDGWLEIELAEYF 3
                  R+DGWLEIEL E+F
Sbjct: 246 NGQYPKKREDGWLEIELGEFF 266


>ref|XP_002512603.1| conserved hypothetical protein [Ricinus communis]
           gi|223548564|gb|EEF50055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/141 (46%), Positives = 85/141 (60%)
 Frame = -1

Query: 425 PRYWRWTSDSESRFRKVIELISVCWLEIHGKINTSLLSPDTVYKTYLVYKPSEMVYGFDD 246
           PRYWRWTS+ +SRF +V ELI VCWLEI GKI+  +LSP+T+Y  Y VYK +   YGFD 
Sbjct: 128 PRYWRWTSELKSRFEEVAELIGVCWLEICGKISARMLSPETLYAAYFVYKTTAGAYGFDH 187

Query: 245 QAIEISVGLIGEESTTRTVYLDPVGGIHRRDVPAPRLMGLLHNFRSDNQERPRMHVXXXX 66
           Q +E++VGL G E   R+VYLD      +R     R +GL  + R+   + P +      
Sbjct: 188 QPVEVTVGLAGTEGCKRSVYLDAERERQQRYQIVIRRIGLFSHSRALGLQAP-VPTRENN 246

Query: 65  XXXXXXXRKDGWLEIELAEYF 3
                  R+DGWLEIEL  +F
Sbjct: 247 DGMHPQEREDGWLEIELGTFF 267


>ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycine max]
          Length = 303

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/145 (44%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
 Frame = -1

Query: 425 PRYWRWTSDSESRFRKVIELISVCWLEIHGKINTSLLSPDTVYKTYLVYKPSEM-VYGFD 249
           PRYWRWTS  ++RF +V EL SVCWLEI G INT +LSP+T+Y  YLV+KP+    YGFD
Sbjct: 119 PRYWRWTSLPDARFSEVAELRSVCWLEIRGWINTGMLSPETLYGAYLVFKPNPSGFYGFD 178

Query: 248 DQAIEISVGLIGEESTTRTVYLDPVGGIHRRDVPAPRL--MGLLHNFR-SDNQERPRMHV 78
            Q +E+S+G+ G E+  R V+LD   G   R    PR    G+ +  R     E P +  
Sbjct: 179 YQLVEVSIGIAGGENRKRNVFLDAERGRRLRYQIVPRRAGTGIFNRARFLAPVEAPPVED 238

Query: 77  XXXXXXXXXXXRKDGWLEIELAEYF 3
                      R D WLE+EL E+F
Sbjct: 239 NDSLDLQHPKERADEWLEVELGEFF 263


>ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cucumis sativus]
           gi|449477769|ref|XP_004155117.1| PREDICTED: F-box
           protein At2g02240-like [Cucumis sativus]
          Length = 322

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/93 (55%), Positives = 64/93 (68%)
 Frame = -1

Query: 425 PRYWRWTSDSESRFRKVIELISVCWLEIHGKINTSLLSPDTVYKTYLVYKPSEMVYGFDD 246
           PRYWRW+S  E+RF +V EL+SVCWLEI GKI T +LSP T+Y  +LV+KP+   YGF  
Sbjct: 133 PRYWRWSSTPEARFGEVAELVSVCWLEIRGKIETEMLSPGTLYSAHLVFKPTTSSYGFQQ 192

Query: 245 QAIEISVGLIGEESTTRTVYLDPVGGIHRRDVP 147
           Q +E+ VGL G E   RTVYLD V    R+  P
Sbjct: 193 QPVEVGVGLTGTEPVKRTVYLDDVSRDWRQRHP 225


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