BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026470
         (1595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95343.1| retrotransposon protein, putative, Ty3-gypsy subc...   428   e-117
emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa Japonica Group]         426   e-116
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             421   e-115
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   402   e-109
emb|CAH66285.1| OSIGBa0161P06.2 [Oryza sativa Indica Group]           398   e-108

>gb|ABA95343.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2289

 Score =  428 bits (1100), Expect = e-117
 Identities = 232/529 (43%), Positives = 315/529 (59%)
 Frame = +1

Query: 7    IGTIRLPVLFGTSPRQVRHIIKFHIVDTASPYNVVLGRPTLTRLRAVTSIPHHKVKFPTP 186
            +G I LPV FGT        I F + D  + Y+ +LGRP L +  AV    +  +K P P
Sbjct: 1105 LGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGP 1164

Query: 187  HGVGELKGQKETASLCYDTALALGETXXXXXXXXXXXXXEQSTSXXXXXXXXXXXXXXXX 366
             GV  L+   + A  C   +  + +T             E +++                
Sbjct: 1165 RGVLSLRSDIKQAVTCDKESCDMAQTR------------EMASAR--------------- 1197

Query: 367  IEQQKKARTSEHIMHIDKVKISEVDNDNQDSTRPTPAETTKGVEIIPGDITKIVQVGASL 546
             E+ + A T+     +   KIS+        +  T AET K + + P D TK   +GA  
Sbjct: 1198 -EEIRLAATTVSEGEVPAAKISK--------SGETEAETKK-IPLDPSDPTKTAVIGA-- 1245

Query: 547  ADAMLSDLTNLLREFSDIFAWSTTDMTGIDPSIVEHRLDVDPRHKPVKQKRRIFAQERQD 726
                         E   IFAW  +DM GI   ++EH L V    KP+KQ+ R FAQ+R+D
Sbjct: 1246 -------------ELDYIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKD 1292

Query: 727  AIDAEVEKLLSSGVIKEIKYADWLANPVLVKKANGKWRVCVDYTDLNKACPKDSYPLPTI 906
            AI  E+ KLL++G IKE+ + DWLANPVLV+K  G+WR+CVDYTDLNK+CPKD + LP I
Sbjct: 1293 AIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRI 1352

Query: 907  DQLIDATSGHAMLSFMDAFSGYNQVRMAPEDITKTAFITHRGVYSYIYMPFGLVNAGATY 1086
            DQ++D+T+G  +LSF+D +SGY+Q+R+   D  KT+FIT  G Y Y+ MPFGL NAGATY
Sbjct: 1353 DQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATY 1412

Query: 1087 QRLMDKIFKSQLGRNMEVYVDDMIVKSLTIQSHPSDLRECFLNLRRVNMKLNPTKCTFGL 1266
            QR++ + F +Q+GRN+E YVDD++VK+       SDL E F ++R   MKLNP KCTFG+
Sbjct: 1413 QRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGV 1472

Query: 1267 TGGKFLGYLVNRRGIEANPDKIKAILDMKPPTTQKDVQKLTGRLAALRRFISNLAERSLP 1446
              GK LG++V+ RGI+ANP+K+ AIL+MKPP+TQKDVQKLTG +AAL RF+S L ER +P
Sbjct: 1473 PSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMP 1532

Query: 1447 FFDILKGAKNTKSITWTDKCQKSFEEIKHYLVSPPILTKAIPGEPLSLY 1593
            FF +L   K T +  W  + QK+FE+ K  L  PP+L    P EPL LY
Sbjct: 1533 FFKLL---KKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQEPLLLY 1578


>emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa Japonica Group]
          Length = 2008

 Score =  426 bits (1094), Expect = e-116
 Identities = 225/529 (42%), Positives = 313/529 (59%)
 Frame = +1

Query: 7    IGTIRLPVLFGTSPRQVRHIIKFHIVDTASPYNVVLGRPTLTRLRAVTSIPHHKVKFPTP 186
            +G I LPV FGT        I F + D  + Y+ +LGRP L +  AV    +  +K P P
Sbjct: 833  LGQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGP 892

Query: 187  HGVGELKGQKETASLCYDTALALGETXXXXXXXXXXXXXEQSTSXXXXXXXXXXXXXXXX 366
             GV  L+   + A  C   +  +  T             E +++                
Sbjct: 893  RGVLSLRSDIKQAVTCDKESCDMAHTH------------EMASA---------------- 924

Query: 367  IEQQKKARTSEHIMHIDKVKISEVDNDNQDSTRPTPAETTKGVEIIPGDITKIVQVGASL 546
               ++  R +       ++ +++     +   +      TK + + P D TK  +     
Sbjct: 925  ---REDIRLAAATASEGEIPVTKTSKSGESEAK------TKKIPLDPSDPTKTAE----- 970

Query: 547  ADAMLSDLTNLLREFSDIFAWSTTDMTGIDPSIVEHRLDVDPRHKPVKQKRRIFAQERQD 726
                 S L   L+   DIFAW  +DM GI   ++EH L V    KP+KQ+ R FAQ+R+D
Sbjct: 971  -----SALITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKD 1025

Query: 727  AIDAEVEKLLSSGVIKEIKYADWLANPVLVKKANGKWRVCVDYTDLNKACPKDSYPLPTI 906
            AI  E+ KLL++G IKE+ + DWLANPVLV+K  G+WR+CVDYTDLNK+CPKD + LP I
Sbjct: 1026 AIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRI 1085

Query: 907  DQLIDATSGHAMLSFMDAFSGYNQVRMAPEDITKTAFITHRGVYSYIYMPFGLVNAGATY 1086
            DQ++D+T+G  +LSF+D +SGY+Q+R+   D  KT+FIT  G Y Y+ MPFGL NAGATY
Sbjct: 1086 DQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATY 1145

Query: 1087 QRLMDKIFKSQLGRNMEVYVDDMIVKSLTIQSHPSDLRECFLNLRRVNMKLNPTKCTFGL 1266
            QR++ + F +Q+GRN+E YVDD++VK+       SDL E F+++R   MKLNP KCTFG+
Sbjct: 1146 QRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEKCTFGV 1205

Query: 1267 TGGKFLGYLVNRRGIEANPDKIKAILDMKPPTTQKDVQKLTGRLAALRRFISNLAERSLP 1446
              GK LG++V+ RGI+ANP+K+ AIL+MKPP+TQKDVQKLTG +AAL RF+S L ER +P
Sbjct: 1206 PSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMP 1265

Query: 1447 FFDILKGAKNTKSITWTDKCQKSFEEIKHYLVSPPILTKAIPGEPLSLY 1593
            FF +L   K T +  W  + QK+FE+ K  L  PP+L    P EPL LY
Sbjct: 1266 FFKLL---KKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLY 1311


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  421 bits (1083), Expect = e-115
 Identities = 209/370 (56%), Positives = 266/370 (71%)
 Frame = +1

Query: 484  TKGVEIIPGDITKIVQVGASLADAMLSDLTNLLREFSDIFAWSTTDMTGIDPSIVEHRLD 663
            T+ V I   D T+ V VGA ++ ++  +L  LL+  S  FAWS  DM GIDP+I  H L+
Sbjct: 758  TEMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELN 817

Query: 664  VDPRHKPVKQKRRIFAQERQDAIDAEVEKLLSSGVIKEIKYADWLANPVLVKKANGKWRV 843
            VDP  KPVKQKRR    ER  A++ EVEKLL +G I E+KY +WLANPV+VKK NGKWRV
Sbjct: 818  VDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRV 877

Query: 844  CVDYTDLNKACPKDSYPLPTIDQLIDATSGHAMLSFMDAFSGYNQVRMAPEDITKTAFIT 1023
            CVDYTDLNKACPKDSYPLP ID+L++ATSG+ +LSFMDAFSGYNQ+ M  +D  KT+F+T
Sbjct: 878  CVDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVT 937

Query: 1024 HRGVYSYIYMPFGLVNAGATYQRLMDKIFKSQLGRNMEVYVDDMIVKSLTIQSHPSDLRE 1203
             RG Y Y  M FGL NAGATYQR ++K+   Q+GR +EVY+DDM+VKSL  + H   L +
Sbjct: 938  DRGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSK 997

Query: 1204 CFLNLRRVNMKLNPTKCTFGLTGGKFLGYLVNRRGIEANPDKIKAILDMKPPTTQKDVQK 1383
            CF  L    MKLNPTKCTFG+T G+FLGY+V +RGIEANP +I+AIL++  P   ++VQ+
Sbjct: 998  CFDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQR 1057

Query: 1384 LTGRLAALRRFISNLAERSLPFFDILKGAKNTKSITWTDKCQKSFEEIKHYLVSPPILTK 1563
            LTGR+AAL RFIS   ++ LPF+++L   K      W    +++FE++K YL +PPIL K
Sbjct: 1058 LTGRIAALNRFISRSTDKCLPFYNLL---KRRAQFDWDKDSEEAFEKLKDYLSTPPILVK 1114

Query: 1564 AIPGEPLSLY 1593
               GE L LY
Sbjct: 1115 PEVGETLYLY 1124


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  402 bits (1032), Expect = e-109
 Identities = 193/377 (51%), Positives = 267/377 (70%)
 Frame = +1

Query: 463  RPTPAETTKGVEIIPGDITKIVQVGASLADAMLSDLTNLLREFSDIFAWSTTDMTGIDPS 642
            +P P   TK V++   D  K + +G +L   +  ++  +++E   +FAWS  ++ G+D S
Sbjct: 914  KPIPEGKTKKVQLDEHDPGKFILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRS 973

Query: 643  IVEHRLDVDPRHKPVKQKRRIFAQERQDAIDAEVEKLLSSGVIKEIKYADWLANPVLVKK 822
            ++EH L +   +KP KQK R  + +RQ A   E+EKLL + VI+E+ + +WLANPVLVKK
Sbjct: 974  LIEHNLAIKSGYKPKKQKLRRMSTDRQQAAKIELEKLLKAKVIREVMHPEWLANPVLVKK 1033

Query: 823  ANGKWRVCVDYTDLNKACPKDSYPLPTIDQLIDATSGHAMLSFMDAFSGYNQVRMAPEDI 1002
            ANGKWR+C+D+TDLNKACPKD +PLP IDQL+DAT+G  ++SF+DA+SGY+QV M  ED 
Sbjct: 1034 ANGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDATAGCELMSFLDAYSGYHQVFMVKEDE 1093

Query: 1003 TKTAFITHRGVYSYIYMPFGLVNAGATYQRLMDKIFKSQLGRNMEVYVDDMIVKSLTIQS 1182
             KT+FIT  G Y +I MPFGL NAGAT+ RL+ K+   QLGRN+E YVDD++VKS    +
Sbjct: 1094 EKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKVLAKQLGRNVEAYVDDIVVKSKQAFT 1153

Query: 1183 HPSDLRECFLNLRRVNMKLNPTKCTFGLTGGKFLGYLVNRRGIEANPDKIKAILDMKPPT 1362
            H  DL+E F NLR+ ++KLNP KC FG+  GK LG+LV++RGIEANPDKI AI  M+PP 
Sbjct: 1154 HGKDLQETFENLRKCSVKLNPEKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPK 1213

Query: 1363 TQKDVQKLTGRLAALRRFISNLAERSLPFFDILKGAKNTKSITWTDKCQKSFEEIKHYLV 1542
              ++VQ+LTGR+A+L RF+S  AE+ LPFF  L+GA    +  WT +CQ++F+++K YL 
Sbjct: 1214 NTREVQRLTGRMASLSRFLSKSAEKGLPFFKTLRGA---NTFEWTAECQQAFDDLKKYLH 1270

Query: 1543 SPPILTKAIPGEPLSLY 1593
              P L     G+PL +Y
Sbjct: 1271 EMPTLASPPKGQPLLMY 1287


>emb|CAH66285.1| OSIGBa0161P06.2 [Oryza sativa Indica Group]
          Length = 1987

 Score =  398 bits (1023), Expect = e-108
 Identities = 194/350 (55%), Positives = 250/350 (71%)
 Frame = +1

Query: 544  LADAMLSDLTNLLREFSDIFAWSTTDMTGIDPSIVEHRLDVDPRHKPVKQKRRIFAQERQ 723
            LA A  S L   L+   DIFAW  +DM GI   ++EH L V    KP+KQ+ R FAQ+R+
Sbjct: 930  LAAATESALITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRK 989

Query: 724  DAIDAEVEKLLSSGVIKEIKYADWLANPVLVKKANGKWRVCVDYTDLNKACPKDSYPLPT 903
            DAI  E+ KLL++G IKE+ + DWLANPVLV+K  G+WR+CVDYTDLNKACPKD + LP 
Sbjct: 990  DAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKACPKDPFGLPR 1049

Query: 904  IDQLIDATSGHAMLSFMDAFSGYNQVRMAPEDITKTAFITHRGVYSYIYMPFGLVNAGAT 1083
            IDQ++D+T+G  +LSF+D +SGY+Q+R+   D  KT+FIT  G Y YI MPFGL NAGAT
Sbjct: 1050 IDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYITMPFGLKNAGAT 1109

Query: 1084 YQRLMDKIFKSQLGRNMEVYVDDMIVKSLTIQSHPSDLRECFLNLRRVNMKLNPTKCTFG 1263
            YQR++ + F +Q+GRN+E YVDD++VK+       SDL E F ++R   MKLNP KCTFG
Sbjct: 1110 YQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKGDLISDLEETFASIRAFRMKLNPEKCTFG 1169

Query: 1264 LTGGKFLGYLVNRRGIEANPDKIKAILDMKPPTTQKDVQKLTGRLAALRRFISNLAERSL 1443
            +  GK LG++V+ RGI+ANP+K+ AIL+MKPP+TQKDVQKLTG +AAL RF+S L ER +
Sbjct: 1170 VPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGM 1229

Query: 1444 PFFDILKGAKNTKSITWTDKCQKSFEEIKHYLVSPPILTKAIPGEPLSLY 1593
            PFF +L   K T    W  + QK+FE+ K  L  PP+L    P EPL LY
Sbjct: 1230 PFFKLL---KKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLY 1276