BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026467
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...   102   8e-20
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...   100   2e-19
gb|ABN08838.1| Thioredoxin-like fold [Medicago truncatula]             97   3e-18
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    95   1e-17
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    95   1e-17

>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score =  102 bits (253), Expect = 8e-20
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
 Frame = +2

Query: 5   ILSIPM-DKEVEDS*YWKKDKFGNYSVKSAYMLIEKGRVDTAAANNSGFWRSLWNLKIPP 181
           ILSIP+ ++ + D+  WK    GNY+VKSAY +         +A+N+  W ++WNL IP 
Sbjct: 66  ILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICSDLLHPHDSAHNNSSWMNIWNLNIPH 125

Query: 182 KVKSFLWRACTDCLPTKDLLRSRKV*IDASLLISDVPSFSEWLSRVFELHSK-------- 337
           +V++FLWR   +CLPT+  L +R +  + S ++ +  +F+E  + +F + +K        
Sbjct: 126 RVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFE--NFAECHTHLFFVCAKAMDCWKNI 183

Query: 338 -------ELI----------------------QTAVMACWMIWKSRNALIWNQC-SMNPN 427
                  EL+                      Q A M  W +WKSRN  +W+   +    
Sbjct: 184 GLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQAAGMLLWSLWKSRNIKLWDSTDTTTAI 243

Query: 428 EVASARSILDQWKNVQDHTFDRFLGYMSPEDGNEH--WSLPSCNSVKINSDAAIFEESDT 601
            ++ A+  L +W  +Q            P + N H  W  P+   +K N DAAIF+ +  
Sbjct: 244 TISRAKDTLHEWSCMQS-------AKTQPINPNHHISWVKPTGGMIKCNMDAAIFQNNVA 296

Query: 602 YGIAFIVRDSAGQLVEAKT 658
            G     R+S  +L+  K+
Sbjct: 297 AGYGICCRNSEDELLLGKS 315


>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score =  100 bits (249), Expect = 2e-19
 Identities = 70/212 (33%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
 Frame = +2

Query: 50  WKKDKFGNYSVKSAYMLIEKGRVDTAAANNSGFWRSLWNLKIPPKVKSFLWRACTDCLPT 229
           W+ +K GNYS++SAY  I            +G W S+WNLK+PPKVK+F+WRAC +CLPT
Sbjct: 180 WRFEKDGNYSIRSAYCDILNNNTALNQHRVNGSWNSIWNLKLPPKVKNFMWRACRNCLPT 239

Query: 230 KDLLRSRKV*IDASLLISDVPSFSEWLSRVFELHSKELIQTAVMACWM---IWKSRNALI 400
           +  L+SR V       +   P   E  S +F    K +      +CW    +W      I
Sbjct: 240 RVKLQSRGVQCPMDCAVYAGP--YEDSSHLFFDCGKSI------SCWQRSDLWNGILQSI 291

Query: 401 WNQCSMNPNEVAS-----ARSILDQWKNVQDHTFDRFLGYMSPEDGNEHWSLPSCNSVKI 565
               S   NE        A S+L  WKN Q           +       W+ PS    K 
Sbjct: 292 HPSASFVENESTQDICDRAGSLLTSWKNAQ--IVRHVQANSAATSVCVQWNKPSPGRYKC 349

Query: 566 NSDAAIFEESDTYGIAFIVRDSAGQLVEAKTK 661
           N DA+     +  GI   +RD  G+ V AKT+
Sbjct: 350 NVDASFSNSLNKVGIGVCIRDEEGRFVFAKTE 381


>gb|ABN08838.1| Thioredoxin-like fold [Medicago truncatula]
          Length = 198

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
 Frame = +2

Query: 50  WKKDKFGNYSVKSAYMLIEKGRVDTAAANNSGFWRSLWNLKIPPKVKSFLWRACTDCLPT 229
           WK +K G YSVKSAY  I    V       SG W  +W+LK+PPKVK+FLWRAC +CLPT
Sbjct: 8   WKFEKDGAYSVKSAYKDILNHDVSVVQHRVSGNWNCVWSLKLPPKVKNFLWRACRNCLPT 67

Query: 230 KDLLRSRKV*IDA--------SLLISDVPSFSEWLSRVFEL------HSKELIQTAVMAC 367
           +  L+ + V            S L++   + + + + VF +      H K++    +   
Sbjct: 68  RICLQVKGVQCTDRCARIGLWSPLMATFDTNASFPTNVFAILQHLDQHQKQVFDVTL--- 124

Query: 368 WMIWKSRNALIWNQCSMNPNEVAS-ARSILDQWKNVQDHTFDRFLGYMSPED----GNEH 532
           W IWK RN  +WN  +     +   A S+L  W+N Q       + +  P+      +  
Sbjct: 125 WSIWKHRNNKVWNNVTETSQAICDRASSLLSSWRNAQ------IILHPIPQHSITLNDLK 178

Query: 533 WSLPSCNSVKINSDAAIFE 589
           W  PS +  K N DA+  +
Sbjct: 179 WVKPSPDRFKCNVDASFLK 197


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 77/288 (26%), Positives = 117/288 (40%), Gaps = 70/288 (24%)
 Frame = +2

Query: 5   ILSIPMDKEVE-DS*YWKKDKFGNYSVKSAYMLIEKGRVDTAAANNSGFWRSLWNLKIPP 181
           I++ P+  +V+ D   WK +  G YSV+SAY L  +  +DT+     G+W  +W LK+PP
Sbjct: 119 IINTPLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPP 178

Query: 182 KVKSFLWRACTDCLPTKDLLRSRKV-----*IDASLLISDVP------SFSEWLSRVFEL 328
           K+K+F+WR C   LPT++ LR + V      ++ S    DV       +F   + ++ +L
Sbjct: 179 KIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDL 238

Query: 329 HSKELIQTAV-------------------------MACWMIWKSRNALIW----NQCSMN 421
            S+  IQ AV                         +  W +WK RN  +W      C+M 
Sbjct: 239 WSE--IQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAMT 296

Query: 422 PNEVASARSILDQWK--------NVQDHTFDRFLGYMSPEDGNEH--------------- 532
              V  AR ++++W+            HT  +     + +    H               
Sbjct: 297 ---VDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVASAVSAQQS 353

Query: 533 ------WSLPSCNSVKINSDAAIFEESDTYGIAFIVRDSAGQLVEAKT 658
                 W  PS    K N DA      +  GI   VRD  G  V AKT
Sbjct: 354 LVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKT 401


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 612

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 77/288 (26%), Positives = 117/288 (40%), Gaps = 70/288 (24%)
 Frame = +2

Query: 5    ILSIPMDKEVE-DS*YWKKDKFGNYSVKSAYMLIEKGRVDTAAANNSGFWRSLWNLKIPP 181
            I++ P+  +V+ D   WK +  G YSV+SAY L  +  +DT+     G+W  +W LK+PP
Sbjct: 212  IINTPLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPP 271

Query: 182  KVKSFLWRACTDCLPTKDLLRSRKV-----*IDASLLISDVP------SFSEWLSRVFEL 328
            K+K+F+WR C   LPT++ LR + V      ++ S    DV       +F   + ++ +L
Sbjct: 272  KIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDL 331

Query: 329  HSKELIQTAV-------------------------MACWMIWKSRNALIW----NQCSMN 421
             S+  IQ AV                         +  W +WK RN  +W      C+M 
Sbjct: 332  WSE--IQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAMT 389

Query: 422  PNEVASARSILDQWK--------NVQDHTFDRFLGYMSPEDGNEH--------------- 532
               V  AR ++++W+            HT  +     + +    H               
Sbjct: 390  ---VDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVASAVSAQQS 446

Query: 533  ------WSLPSCNSVKINSDAAIFEESDTYGIAFIVRDSAGQLVEAKT 658
                  W  PS    K N DA      +  GI   VRD  G  V AKT
Sbjct: 447  LVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKT 494