BLASTX nr result

ID: Bupleurum21_contig00026457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026457
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564914.1| uncharacterized protein [Arabidopsis thaliana] ...    66   3e-09
ref|XP_002887152.1| hypothetical protein ARALYDRAFT_894553 [Arab...    65   6e-09
ref|XP_003630934.1| hypothetical protein MTR_8g105190 [Medicago ...    65   6e-09
ref|XP_002311528.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
dbj|BAJ34019.1| unnamed protein product [Thellungiella halophila]      60   2e-07

>ref|NP_564914.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12324082|gb|AAG52010.1|AC012563_20 unknown protein;
           70659-70456 [Arabidopsis thaliana]
           gi|21537331|gb|AAM61672.1| unknown [Arabidopsis
           thaliana] gi|89111818|gb|ABD60681.1| At1g67920
           [Arabidopsis thaliana] gi|332196601|gb|AEE34722.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 67

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/72 (55%), Positives = 48/72 (66%)
 Frame = -3

Query: 344 MEQKNNKEEEAYLGVAVHSQVRKIKQEMEKIKQPLLEQPEFLHRPIFRHMKRQQQRSRSP 165
           ME K +   E   G  +HSQV KIK+E EKI+QP L+QPE   R +   +KR +QRSRSP
Sbjct: 1   MENKTDNGNED--GPIIHSQVEKIKKEFEKIRQPSLQQPEM--RRVLSEIKR-RQRSRSP 55

Query: 164 LGLA*RPISVGN 129
           LGL  R ISVGN
Sbjct: 56  LGLGERSISVGN 67


>ref|XP_002887152.1| hypothetical protein ARALYDRAFT_894553 [Arabidopsis lyrata subsp.
           lyrata] gi|297332993|gb|EFH63411.1| hypothetical protein
           ARALYDRAFT_894553 [Arabidopsis lyrata subsp. lyrata]
          Length = 67

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/72 (54%), Positives = 48/72 (66%)
 Frame = -3

Query: 344 MEQKNNKEEEAYLGVAVHSQVRKIKQEMEKIKQPLLEQPEFLHRPIFRHMKRQQQRSRSP 165
           ME K +   E   G  +H+QV KIK+E EKI+QP L+QPE   R +   +KR +QRSRSP
Sbjct: 1   MENKTDNGNED--GPIIHTQVEKIKKEFEKIRQPSLQQPEM--RRVLSEIKR-RQRSRSP 55

Query: 164 LGLA*RPISVGN 129
           LGL  R ISVGN
Sbjct: 56  LGLGERSISVGN 67


>ref|XP_003630934.1| hypothetical protein MTR_8g105190 [Medicago truncatula]
           gi|355524956|gb|AET05410.1| hypothetical protein
           MTR_8g105190 [Medicago truncatula]
          Length = 72

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/69 (55%), Positives = 48/69 (69%)
 Frame = -3

Query: 332 NNKEEEAYLGVAVHSQVRKIKQEMEKIKQPLLEQPEFLHRPIFRHMKRQQQRSRSPLGLA 153
           N  +EE Y G+AVHSQV KIK+E+EKIKQP LE   ++ R   + +KR Q  SRSPLGLA
Sbjct: 8   NKSDEEVYAGLAVHSQVIKIKEEIEKIKQPSLEAELYMRR--LKDVKRLQ--SRSPLGLA 63

Query: 152 *RPISVGNS 126
            R I + +S
Sbjct: 64  ERTILLSHS 72


>ref|XP_002311528.1| predicted protein [Populus trichocarpa] gi|222851348|gb|EEE88895.1|
           predicted protein [Populus trichocarpa]
          Length = 78

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/69 (52%), Positives = 47/69 (68%)
 Frame = -3

Query: 335 KNNKEEEAYLGVAVHSQVRKIKQEMEKIKQPLLEQPEFLHRPIFRHMKRQQQRSRSPLGL 156
           +N   +  Y+G  +HSQV KI+QE +KIK P L+Q E   R + +  +  +QRSRSPLGL
Sbjct: 13  RNGDGDHGYVGFPIHSQVIKIRQEFDKIKHPSLQQLEV--RGVVK-CRINRQRSRSPLGL 69

Query: 155 A*RPISVGN 129
           A RPISVGN
Sbjct: 70  AERPISVGN 78


>dbj|BAJ34019.1| unnamed protein product [Thellungiella halophila]
          Length = 66

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/72 (55%), Positives = 44/72 (61%)
 Frame = -3

Query: 344 MEQKNNKEEEAYLGVAVHSQVRKIKQEMEKIKQPLLEQPEFLHRPIFRHMKRQQQRSRSP 165
           ME K NK  E       HSQV KIK+E EKI QP L+QPE   R +     R +QRSRSP
Sbjct: 1   MENKTNKGSE---DGPKHSQVVKIKREFEKISQPSLQQPEM--RRLLGEFTR-RQRSRSP 54

Query: 164 LGLA*RPISVGN 129
           LGL  R ISVGN
Sbjct: 55  LGLGERSISVGN 66


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