BLASTX nr result

ID: Bupleurum21_contig00026439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026439
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   268   4e-70
emb|CBI21870.3| unnamed protein product [Vitis vinifera]              268   4e-70
emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]   268   4e-70
ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina...   267   6e-70
ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   264   6e-69

>ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Vitis vinifera]
          Length = 851

 Score =  268 bits (684), Expect = 4e-70
 Identities = 134/144 (93%), Positives = 140/144 (97%)
 Frame = +3

Query: 3   KMRALEKLMVSWISQGDKILLFSHSVRMLDILEKLLIRKGYTFSRLDGSTPTGLRQSLVD 182
           KMRALEKLM+SW+S GDKILLFS+SVRMLDILEK LIRKGY FSRLDGSTPT LRQSLVD
Sbjct: 519 KMRALEKLMLSWVSHGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVD 578

Query: 183 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 362
           DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR+GQKRHV+V
Sbjct: 579 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 638

Query: 363 FRLLAAGSLEELIYSRQVYKQQLS 434
           FRLLAAGSLEEL+YSRQVYKQQLS
Sbjct: 639 FRLLAAGSLEELVYSRQVYKQQLS 662


>emb|CBI21870.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score =  268 bits (684), Expect = 4e-70
 Identities = 134/144 (93%), Positives = 140/144 (97%)
 Frame = +3

Query: 3   KMRALEKLMVSWISQGDKILLFSHSVRMLDILEKLLIRKGYTFSRLDGSTPTGLRQSLVD 182
           KMRALEKLM+SW+S GDKILLFS+SVRMLDILEK LIRKGY FSRLDGSTPT LRQSLVD
Sbjct: 519 KMRALEKLMLSWVSHGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVD 578

Query: 183 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 362
           DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR+GQKRHV+V
Sbjct: 579 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 638

Query: 363 FRLLAAGSLEELIYSRQVYKQQLS 434
           FRLLAAGSLEEL+YSRQVYKQQLS
Sbjct: 639 FRLLAAGSLEELVYSRQVYKQQLS 662


>emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]
          Length = 874

 Score =  268 bits (684), Expect = 4e-70
 Identities = 134/144 (93%), Positives = 140/144 (97%)
 Frame = +3

Query: 3   KMRALEKLMVSWISQGDKILLFSHSVRMLDILEKLLIRKGYTFSRLDGSTPTGLRQSLVD 182
           KMRALEKLM+SW+S GDKILLFS+SVRMLDILEK LIRKGY FSRLDGSTPT LRQSLVD
Sbjct: 519 KMRALEKLMLSWVSHGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVD 578

Query: 183 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 362
           DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR+GQKRHV+V
Sbjct: 579 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 638

Query: 363 FRLLAAGSLEELIYSRQVYKQQLS 434
           FRLLAAGSLEEL+YSRQVYKQQLS
Sbjct: 639 FRLLAAGSLEELVYSRQVYKQQLS 662


>ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
           [Glycine max]
          Length = 870

 Score =  267 bits (683), Expect = 6e-70
 Identities = 134/144 (93%), Positives = 139/144 (96%)
 Frame = +3

Query: 3   KMRALEKLMVSWISQGDKILLFSHSVRMLDILEKLLIRKGYTFSRLDGSTPTGLRQSLVD 182
           KMRALEKL+ SW SQGDK+LLFS+SVRMLDILEK LIRKGY FSRLDGSTPT LRQSLVD
Sbjct: 520 KMRALEKLLYSWFSQGDKVLLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVD 579

Query: 183 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 362
           DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV+V
Sbjct: 580 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVV 639

Query: 363 FRLLAAGSLEELIYSRQVYKQQLS 434
           FRLLAAGSLEEL+YSRQVYKQQLS
Sbjct: 640 FRLLAAGSLEELVYSRQVYKQQLS 663


>ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Cucumis sativus]
          Length = 840

 Score =  264 bits (674), Expect = 6e-69
 Identities = 131/144 (90%), Positives = 139/144 (96%)
 Frame = +3

Query: 3   KMRALEKLMVSWISQGDKILLFSHSVRMLDILEKLLIRKGYTFSRLDGSTPTGLRQSLVD 182
           KMRAL+KL  SW SQGDKILLFS+SVRMLDILEK ++RKGY+FSRLDGSTPT +RQSLVD
Sbjct: 498 KMRALDKLFSSWTSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGSTPTNMRQSLVD 557

Query: 183 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 362
           DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV+V
Sbjct: 558 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVV 617

Query: 363 FRLLAAGSLEELIYSRQVYKQQLS 434
           FRLLAAGSLEEL+YSRQVYKQQLS
Sbjct: 618 FRLLAAGSLEELVYSRQVYKQQLS 641


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