BLASTX nr result

ID: Bupleurum21_contig00026422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026422
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   104   7e-21
ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   100   1e-19
emb|CBI38291.3| unnamed protein product [Vitis vinifera]              100   1e-19
emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]   100   1e-19
ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    96   3e-18

>ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
            max]
          Length = 879

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/111 (47%), Positives = 70/111 (63%)
 Frame = +3

Query: 21   NNAKYNRKKSMQNGLMGMLTRGLKETIVARLDEIKSNSMHMTDISCANNFASSYVSDEWD 200
            ++A+ +R+  M NGLM ML+RGL+ET+VAR D+I+  S    +       +  YV DEWD
Sbjct: 769  DSAQDSRRDQMHNGLMSMLSRGLEETVVARWDDIELPSSQHLESKNDKLVSIGYVGDEWD 828

Query: 201  RKYDQGNRKRTGSFKKEFSGQNTVQEIVSMNKKAKRARFDQSSSGSRPFRI 353
             +YD+G RK+   FK  F G N  QEI     K KRA+FDQS SG+ PFRI
Sbjct: 829  EEYDKGKRKKIRGFKHSFGGPNLFQEIAVEKSKFKRAKFDQSCSGNPPFRI 879


>ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
            vinifera]
          Length = 997

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/106 (48%), Positives = 66/106 (62%)
 Frame = +3

Query: 36   NRKKSMQNGLMGMLTRGLKETIVARLDEIKSNSMHMTDISCANNFASSYVSDEWDRKYDQ 215
            +++  MQNGLM MLTRGL ETIVAR DEI+  S  + +          YV DEWD +YD+
Sbjct: 892  SKRDQMQNGLMSMLTRGLDETIVARWDEIEWPSNRVMESRSVEGVTIGYVPDEWDEEYDR 951

Query: 216  GNRKRTGSFKKEFSGQNTVQEIVSMNKKAKRARFDQSSSGSRPFRI 353
            G RK+  S    F G N  QEI +     K+A+ D+SSSG++PFRI
Sbjct: 952  GKRKKVRSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQPFRI 997


>emb|CBI38291.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/106 (48%), Positives = 66/106 (62%)
 Frame = +3

Query: 36  NRKKSMQNGLMGMLTRGLKETIVARLDEIKSNSMHMTDISCANNFASSYVSDEWDRKYDQ 215
           +++  MQNGLM MLTRGL ETIVAR DEI+  S  + +          YV DEWD +YD+
Sbjct: 30  SKRDQMQNGLMSMLTRGLDETIVARWDEIEWPSNRVMESRSVEGVTIGYVPDEWDEEYDR 89

Query: 216 GNRKRTGSFKKEFSGQNTVQEIVSMNKKAKRARFDQSSSGSRPFRI 353
           G RK+  S    F G N  QEI +     K+A+ D+SSSG++PFRI
Sbjct: 90  GKRKKVRSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQPFRI 135


>emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
          Length = 1142

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/106 (48%), Positives = 66/106 (62%)
 Frame = +3

Query: 36   NRKKSMQNGLMGMLTRGLKETIVARLDEIKSNSMHMTDISCANNFASSYVSDEWDRKYDQ 215
            +++  MQNGLM MLTRGL ETIVAR DEI+  S  + +          YV DEWD +YD+
Sbjct: 1037 SKRDQMQNGLMSMLTRGLDETIVARWDEIEWPSNRVMESRSVEGVTIGYVPDEWDEEYDR 1096

Query: 216  GNRKRTGSFKKEFSGQNTVQEIVSMNKKAKRARFDQSSSGSRPFRI 353
            G RK+  S    F G N  QEI +     K+A+ D+SSSG++PFRI
Sbjct: 1097 GKRKKVRSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQPFRI 1142


>ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
            vinifera]
          Length = 955

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/117 (41%), Positives = 69/117 (58%)
 Frame = +3

Query: 3    WIDKGHNNAKYNRKKSMQNGLMGMLTRGLKETIVARLDEIKSNSMHMTDISCANNFASSY 182
            W  +G ++   +++  MQNGLM MLTRGL +TIVAR DEI+  S  + +          Y
Sbjct: 839  WDAQGSDSLNDSKRDRMQNGLMSMLTRGLDKTIVARWDEIEWPSNRVMESRSVEGVTIGY 898

Query: 183  VSDEWDRKYDQGNRKRTGSFKKEFSGQNTVQEIVSMNKKAKRARFDQSSSGSRPFRI 353
            V DEWD +YD+G RK+  S K  F   N  QEI +     K+A+ D+SSS ++P R+
Sbjct: 899  VPDEWDEEYDRGKRKKVRSSKGSFGEPNPFQEIATKKAHFKKAKMDRSSSRNQPLRM 955


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