BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026419
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   234   7e-60
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   230   8e-59
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   224   6e-57
ref|NP_178282.2| cleavage and polyadenylation specificity factor...   220   1e-55
gb|AAN87883.1| FEG protein [Arabidopsis thaliana]                     220   1e-55

>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  234 bits (596), Expect = 7e-60
 Identities = 108/122 (88%), Positives = 116/122 (95%)
 Frame = +1

Query: 61  MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGHLDHQRYPDFSRISNSRDFDQSL 240
           MAIECLVLGAGQEVGKSCVVVTINGK+IMFDCGMHMG+ DH+RYPDFS IS SRDFD SL
Sbjct: 1   MAIECLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYDDHRRYPDFSLISKSRDFDHSL 60

Query: 241 TCIIITHFHLDHIGALPYFTEVCGYKGPIFMTYPTKALAPLMLEDYRKVMVDRRGEEEQF 420
            C+IITHFHLDH+GALPYFTEVCGY GPI+MTYPTKALAPLMLED+RKV+VDRRGEEEQF
Sbjct: 61  DCVIITHFHLDHVGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDFRKVLVDRRGEEEQF 120

Query: 421 TS 426
           TS
Sbjct: 121 TS 122


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  230 bits (587), Expect = 8e-59
 Identities = 105/123 (85%), Positives = 116/123 (94%)
 Frame = +1

Query: 61  MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGHLDHQRYPDFSRISNSRDFDQSL 240
           MAIECLVLGAGQEVGKSCVVVTINGK+IMFDCGMHMG+ DH+RYPDFS IS S DFD +L
Sbjct: 1   MAIECLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYDDHRRYPDFSLISKSGDFDSAL 60

Query: 241 TCIIITHFHLDHIGALPYFTEVCGYKGPIFMTYPTKALAPLMLEDYRKVMVDRRGEEEQF 420
            C+IITHFHLDH+GALPYFTEVCGY GP++MTYPTKAL+PLMLEDYRKVMVDRRGEEEQF
Sbjct: 61  HCVIITHFHLDHVGALPYFTEVCGYNGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQF 120

Query: 421 TSE 429
           T++
Sbjct: 121 TAD 123


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Cucumis sativus]
          Length = 649

 Score =  224 bits (571), Expect = 6e-57
 Identities = 102/123 (82%), Positives = 115/123 (93%)
 Frame = +1

Query: 61  MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGHLDHQRYPDFSRISNSRDFDQSL 240
           MAI+CLVLGAGQEVGKSCVVVTINGK+IMFDCGMH+G++DH+RYPDFSRIS S D++  L
Sbjct: 1   MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRISASHDYNNVL 60

Query: 241 TCIIITHFHLDHIGALPYFTEVCGYKGPIFMTYPTKALAPLMLEDYRKVMVDRRGEEEQF 420
           +CIIITHFHLDHIGALPYFTEVCGY GPI+MTYPT ALAP+ LEDYRKVMVDRRGE EQF
Sbjct: 61  SCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQF 120

Query: 421 TSE 429
           T++
Sbjct: 121 TND 123


>ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
           [Arabidopsis thaliana]
           gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName:
           Full=Cleavage and polyadenylation specificity factor
           subunit 3-II; AltName: Full=Cleavage and polyadenylation
           specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
           Short=CPSF 73 kDa subunit II; AltName: Full=Protein
           EMBRYO SAC DEVELOPMENT ARREST 26
           gi|62320470|dbj|BAD94982.1| putative cleavage and
           polyadenylation specifity factor [Arabidopsis thaliana]
           gi|330250395|gb|AEC05489.1| cleavage and polyadenylation
           specificity factor subunit 3-II [Arabidopsis thaliana]
          Length = 613

 Score =  220 bits (560), Expect = 1e-55
 Identities = 100/122 (81%), Positives = 113/122 (92%)
 Frame = +1

Query: 61  MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGHLDHQRYPDFSRISNSRDFDQSL 240
           MAI+CLVLGAGQE+GKSCVVVTINGKKIMFDCGMHMG  DH RYP+FS IS S DFD ++
Sbjct: 1   MAIDCLVLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAI 60

Query: 241 TCIIITHFHLDHIGALPYFTEVCGYKGPIFMTYPTKALAPLMLEDYRKVMVDRRGEEEQF 420
           +CIIITHFH+DH+GALPYFTEVCGY GPI+M+YPTKAL+PLMLEDYR+VMVDRRGEEE F
Sbjct: 61  SCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELF 120

Query: 421 TS 426
           T+
Sbjct: 121 TT 122


>gb|AAN87883.1| FEG protein [Arabidopsis thaliana]
          Length = 613

 Score =  220 bits (560), Expect = 1e-55
 Identities = 100/122 (81%), Positives = 113/122 (92%)
 Frame = +1

Query: 61  MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGHLDHQRYPDFSRISNSRDFDQSL 240
           MAI+CLVLGAGQE+GKSCVVVTINGKKIMFDCGMHMG  DH RYP+FS IS S DFD ++
Sbjct: 1   MAIDCLVLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAI 60

Query: 241 TCIIITHFHLDHIGALPYFTEVCGYKGPIFMTYPTKALAPLMLEDYRKVMVDRRGEEEQF 420
           +CIIITHFH+DH+GALPYFTEVCGY GPI+M+YPTKAL+PLMLEDYR+VMVDRRGEEE F
Sbjct: 61  SCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELF 120

Query: 421 TS 426
           T+
Sbjct: 121 TT 122