BLASTX nr result

ID: Bupleurum21_contig00026417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026417
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   315   8e-84
ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric...   304   2e-80
gb|AFK37461.1| unknown [Lotus japonicus]                              299   5e-79
ref|XP_004146506.1| PREDICTED: probable E3 ubiquitin-protein lig...   298   1e-78
ref|XP_003612038.1| RCC1 and BTB domain-containing protein [Medi...   291   1e-76

>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  315 bits (807), Expect = 8e-84
 Identities = 157/250 (62%), Positives = 187/250 (74%)
 Frame = +2

Query: 2   FGWGYSADGRLGRIGNTREDSSLESRAGMLKITEDNKSSTLETAEKLVLEAMEKEKDMPI 181
           FGWGY ADGRLG++G   E S L+S   ++K  E    ST+E AE+LVLE MEKEKDMPI
Sbjct: 165 FGWGYLADGRLGKMGGLVEASPLDSSMNVVK-HEVITQSTVEVAERLVLEGMEKEKDMPI 223

Query: 182 VWEPCLIEELRGVEVTDMACGLDHSLILCRDGTLFSSGSNIYGQLGRSAPNMGLLPVDIS 361
           VW+PC +EEL+GVEV D+ACGLDHSL+LCRDGTL SSGSN+YGQLGR+  +MG  PVDIS
Sbjct: 224 VWDPCSVEELKGVEVVDIACGLDHSLVLCRDGTLLSSGSNVYGQLGRANHDMGFFPVDIS 283

Query: 362 FNSVSVASGLGHSLAICKDLCANKADDSTKIVSWGWNCSSQLGREGPENLPVMVEALAEE 541
           F ++++ASGLGHSLAIC+        D+T IVSWGWN SSQLGR GPEN+P+ VE LA E
Sbjct: 284 FPALAIASGLGHSLAICQAKSPEGKGDATSIVSWGWNQSSQLGRPGPENVPMEVEGLAGE 343

Query: 542 NPISVSGGRVHSIALTSKREVWVWXXXXXXXXXXXXXXDEVEPVLLDNLEDRNVLQVVSG 721
             I VSGGRVHSIA+TSK EVWVW              DE EP++LD+LE   VLQ VSG
Sbjct: 344 TAILVSGGRVHSIAVTSKGEVWVWGCGRNGRLGIGSSCDEAEPIMLDSLEGCEVLQAVSG 403

Query: 722 FDHNLVLTSE 751
           FDHNL+L ++
Sbjct: 404 FDHNLILIAQ 413


>ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
           gi|223536120|gb|EEF37775.1| cell cycle regulatory
           protein, putative [Ricinus communis]
          Length = 441

 Score =  304 bits (778), Expect = 2e-80
 Identities = 151/250 (60%), Positives = 182/250 (72%)
 Frame = +2

Query: 2   FGWGYSADGRLGRIGNTREDSSLESRAGMLKITEDNKSSTLETAEKLVLEAMEKEKDMPI 181
           FGWGYSADGRLG+I    E S+L+S A      +      LE +E+LVLE MEKE DMPI
Sbjct: 197 FGWGYSADGRLGKIMGALEVSALDSNAN-----QQVPKLMLEASERLVLEGMEKENDMPI 251

Query: 182 VWEPCLIEELRGVEVTDMACGLDHSLILCRDGTLFSSGSNIYGQLGRSAPNMGLLPVDIS 361
           +W+PCL+EEL G +V D+ACGLDHSL+LC DGTL SSGSNIYGQLGR+   +GL PVD++
Sbjct: 252 LWDPCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDLN 311

Query: 362 FNSVSVASGLGHSLAICKDLCANKADDSTKIVSWGWNCSSQLGREGPENLPVMVEALAEE 541
            +  S+A+GLGHSLAIC+   ++   D+  IVSWGWN SSQLGR GPE +P+ +E LA E
Sbjct: 312 IHPSSIAAGLGHSLAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGIPLEIEGLAGE 371

Query: 542 NPISVSGGRVHSIALTSKREVWVWXXXXXXXXXXXXXXDEVEPVLLDNLEDRNVLQVVSG 721
            P+SVSGGRVHSIALTSK EVWVW              DE EP+LLD+LE   VLQ+VSG
Sbjct: 372 IPVSVSGGRVHSIALTSKGEVWVWGCGKNGRLGLGSSSDEAEPILLDSLEGYEVLQIVSG 431

Query: 722 FDHNLVLTSE 751
           FDHNLVL S+
Sbjct: 432 FDHNLVLASQ 441


>gb|AFK37461.1| unknown [Lotus japonicus]
          Length = 433

 Score =  299 bits (766), Expect = 5e-79
 Identities = 149/249 (59%), Positives = 181/249 (72%)
 Frame = +2

Query: 2   FGWGYSADGRLGRIGNTREDSSLESRAGMLKITEDNKSSTLETAEKLVLEAMEKEKDMPI 181
           FGWGY ADGR+G++GN  E+S L+S AG +        S LE A K VL+ MEKE DMP 
Sbjct: 192 FGWGYLADGRIGKMGNQLEESPLDSAAGTV--------SDLEVAGKRVLQGMEKENDMPT 243

Query: 182 VWEPCLIEELRGVEVTDMACGLDHSLILCRDGTLFSSGSNIYGQLGRSAPNMGLLPVDIS 361
           VWEP L+EELRGV V D+ACGLDHSLILCR+G L S GS+ YGQLGR+ P++G+ PVDIS
Sbjct: 244 VWEPRLVEELRGVHVIDIACGLDHSLILCRNGALLSCGSDAYGQLGRARPDLGIFPVDIS 303

Query: 362 FNSVSVASGLGHSLAICKDLCANKADDSTKIVSWGWNCSSQLGREGPENLPVMVEALAEE 541
           F  VS+A+GLGHSLAIC+   ++ +  +T I SWGWN SSQLGR GP NLP +++AL  E
Sbjct: 304 FKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALDGE 363

Query: 542 NPISVSGGRVHSIALTSKREVWVWXXXXXXXXXXXXXXDEVEPVLLDNLEDRNVLQVVSG 721
           NP+SVSGGRVHS+ALT+K E+WVW              DE EP+LLD LE   +LQ VSG
Sbjct: 364 NPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSG 423

Query: 722 FDHNLVLTS 748
           FDHNLVL +
Sbjct: 424 FDHNLVLVA 432


>ref|XP_004146506.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus] gi|449499975|ref|XP_004160968.1| PREDICTED:
           probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 452

 Score =  298 bits (762), Expect = 1e-78
 Identities = 146/247 (59%), Positives = 180/247 (72%)
 Frame = +2

Query: 2   FGWGYSADGRLGRIGNTREDSSLESRAGMLKITEDNKSSTLETAEKLVLEAMEKEKDMPI 181
           FGWGY ADGRLG +G T + S L+S +   + T   +   +E AE+LVLE+ME+EK+MPI
Sbjct: 205 FGWGYYADGRLGNVGRTMKMSPLDSSS--YRSTTGQEQPNIELAERLVLESMEEEKNMPI 262

Query: 182 VWEPCLIEELRGVEVTDMACGLDHSLILCRDGTLFSSGSNIYGQLGRSAPNMGLLPVDIS 361
           +WEP L+E+   VEV D+ACGLDHSL+LCRDGTL S GSNIYGQLGR   ++GLLPVD S
Sbjct: 263 IWEPHLVEDETAVEVVDIACGLDHSLVLCRDGTLLSCGSNIYGQLGRVTQDLGLLPVDSS 322

Query: 362 FNSVSVASGLGHSLAICKDLCANKADDSTKIVSWGWNCSSQLGREGPENLPVMVEALAEE 541
           F+  S+A+GLGHSLA+C+D       D+T ++SWGWN +SQLGR GP N+P+ +E LA E
Sbjct: 323 FHVKSIAAGLGHSLALCQDTSNKDIRDATSVISWGWNQTSQLGRVGPNNIPLAIEGLAGE 382

Query: 542 NPISVSGGRVHSIALTSKREVWVWXXXXXXXXXXXXXXDEVEPVLLDNLEDRNVLQVVSG 721
            PIS+SGGR HSIAL SK EVWVW              DE EPV LD+LE+ NV+Q VSG
Sbjct: 383 TPISLSGGRAHSIALGSKGEVWVWGCGRDGRLGLGSSSDESEPVFLDSLENCNVVQAVSG 442

Query: 722 FDHNLVL 742
           FDHNLVL
Sbjct: 443 FDHNLVL 449


>ref|XP_003612038.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|355513373|gb|AES94996.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 442

 Score =  291 bits (745), Expect = 1e-76
 Identities = 146/252 (57%), Positives = 178/252 (70%), Gaps = 3/252 (1%)
 Frame = +2

Query: 2   FGWGYSADGRLGRIGNTR-EDSSLESRAGMLKITEDNKSSTLETAEKLVLEAMEKEKDMP 178
           FGWGY ADGR+G +GN   E S+L+S +          SS LE AEK VL+ M +E +MP
Sbjct: 190 FGWGYYADGRIGNMGNDHLESSTLDSSSSAFSNNTQITSSDLEVAEKKVLQGMAEETNMP 249

Query: 179 IVWEPCLIEELRGVEVTDMACGLDHSLILCRDGTLFSSGSNIYGQLGRSAPNMGLLPVDI 358
           I+WEP L+EELRG++V D+ACGLDHSL+LCRDG L SSGSN+YGQLGR+  ++G  PVDI
Sbjct: 250 IIWEPRLVEELRGIQVVDIACGLDHSLVLCRDGALLSSGSNVYGQLGRAREDLGFFPVDI 309

Query: 359 SFNSVSVASGLGHSLAICK--DLCANKADDSTKIVSWGWNCSSQLGREGPENLPVMVEAL 532
            F  VSVA+GLGHSLAIC+  +  +N    +T I SWGWN SSQLGR GP  LP +++AL
Sbjct: 310 KFTPVSVAAGLGHSLAICQLDESDSNVTLGTTDIASWGWNQSSQLGRAGPAYLPALIDAL 369

Query: 533 AEENPISVSGGRVHSIALTSKREVWVWXXXXXXXXXXXXXXDEVEPVLLDNLEDRNVLQV 712
           A ENP+SVS GR HS+ALTSK E+WVW              DE EP  LD+LE   +LQV
Sbjct: 370 AGENPVSVSAGRAHSVALTSKGEMWVWGSGKNGRLGLSSSVDEDEPFYLDSLEGFQILQV 429

Query: 713 VSGFDHNLVLTS 748
           VSGFDHNLVL +
Sbjct: 430 VSGFDHNLVLVA 441


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