BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026400
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   137   4e-30
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   122   1e-25
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               121   2e-25
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]           118   2e-24

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  137 bits (344), Expect = 4e-30
 Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 13/284 (4%)
 Frame = -2

Query: 815  LWRLAGNSN-SIWISWFKAYVLRCNGLWTVRESRWHSWSIKNILKCRDMAQQYIKYKVGV 639
            +W L  +S+ SIW +W ++ +LR    WT++  +  SW+   ILK R +A   +KY +G 
Sbjct: 178  IWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGD 237

Query: 638  NSSYLLWHDPW-VGEPLINKFSAYIVSVAESTSMARVNSILQDQTWRLPASDH---HLII 471
              +  LW D W    PL + +    +  +     A+VN ++Q+  W+ P +     H II
Sbjct: 238  GMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPII 297

Query: 470  EMRGIVSKITIHREDHIEW--NGEKRIKVCDIWESIRRTQLAPDWVSCVWHQWAIKNCSC 297
            E     S   + ++D + W  +   R  V   WE +RR +   +W   VW + A+   S 
Sbjct: 298  EAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSF 357

Query: 296  FMWLAFKNRLLTKDRMINFGMNVSSTCLLCNNQPETSEHIFNSCSYSRLI----MDECPY 129
             +W+A + +L T+D++  FG++  + C LC    E   H+F  CSY++ I     D C  
Sbjct: 358  LLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDI 417

Query: 128  -QLTRNWNDYLRGNITIGHHKKKQQLA-YLYLSIAICAIWRERN 3
             ++T+ W++++R      H K     +  L  +  +  +W+ERN
Sbjct: 418  PRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERN 461


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  122 bits (305), Expect = 1e-25
 Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 12/267 (4%)
 Frame = -2

Query: 767  KAYVLRCNGLWTVRESRWHSWSIKNILKCRDMAQQYIKYKVGVNSSYLLWHDPW-VGEPL 591
            ++ +LR    WT++  +  SW+   ILK R +A   +KY +G   +  LW D W    PL
Sbjct: 1068 RSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPL 1127

Query: 590  INKFSAYIVSVAESTSMARVNSILQDQTWRLPASDH---HLIIEMRGIVSKITIHREDHI 420
             + +    +  +     A+VN ++Q+  W+ P +     H IIE     S   + ++D I
Sbjct: 1128 ADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEI 1187

Query: 419  EW--NGEKRIKVCDIWESIRRTQLAPDWVSCVWHQWAIKNCSCFMWLAFKNRLLTKDRMI 246
             W  +   R  V   WE +RR +   +W   VW + A+   S  +W+A + +L T+D++ 
Sbjct: 1188 VWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLY 1247

Query: 245  NFGMNVSSTCLLCNNQPETSEHIFNSCSYSRLI----MDECPY-QLTRNWNDYLRGNITI 81
             FG++  + C LC    E   H+F  CSY++ I     D C   ++T+ W++++R     
Sbjct: 1248 RFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVS 1307

Query: 80   GHHKKKQQLA-YLYLSIAICAIWRERN 3
             H K     +  L  +  +  +W+ERN
Sbjct: 1308 WHGKSFVNFSRKLSFAATVYHVWQERN 1334


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  122 bits (305), Expect = 1e-25
 Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 14/285 (4%)
 Frame = -2

Query: 815  LWRLAGNSNSIWISWFKAYVLRCNGLWTVRES-RWHSWSIKNILKCRDMAQQYIKYKVGV 639
            +W++  +SNS+W+ W   ++LR    W V+++    SW  K +LK R++A+   K +VG 
Sbjct: 891  VWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGN 950

Query: 638  NSSYLLWHDPW--VGEPLINKFSAYIVSVAESTSMARVNSILQDQTWRLPASDHHLIIEM 465
                  W+D W  +G+ L       ++ +  S  M  V     ++  R   +D + +IE 
Sbjct: 951  GKQTSFWYDNWSDLGQLLERTGDRGLIDLGISRRMT-VEEAWTNRRQRRHRNDVYNVIED 1009

Query: 464  RGIVSKIT-IHREDHIEWNGEKRI-----KVCDIWESIRRTQLAPDWVSCVWHQWAIKNC 303
                S  T    ED + W G+  +        D W   R T     W   +W   A    
Sbjct: 1010 ALKKSWDTRTETEDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKY 1069

Query: 302  SCFMWLAFKNRLLTKDRMINFGMNVSSTCLLCNNQPETSEHIFNSCSYSRLIMDEC---- 135
            S   WLA   RL T DRMIN+   +++ C+ C    ET +H+F +CS++ +I  +     
Sbjct: 1070 SFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDLARGI 1129

Query: 134  -PYQLTRNWNDYLRGNITIGHHKKKQQLAYLYLSIAICAIWRERN 3
               Q T +W   +       HH+ +  L        I  +WRERN
Sbjct: 1130 FKTQYTSHWQSIIEAITNSQHHRVEWFLRRYVFQATIYIVWRERN 1174


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  121 bits (303), Expect = 2e-25
 Identities = 81/294 (27%), Positives = 127/294 (43%), Gaps = 23/294 (7%)
 Frame = -2

Query: 815  LWRLAGNSNSIWISWFKAYVLRCNGLWTVRES-RWHSWSIKNILKCRDMAQQYIKYKVGV 639
            +WR+  NSNS+W  W   Y++R   +W++++S    SW  + ILK RD+A+ + + +VG 
Sbjct: 538  VWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGN 597

Query: 638  NSSYLLWHDPWVGE----PLINKFSAYIVSVAESTSMARVNSILQDQTWRLPASDHH--- 480
              S   W+D W         +       + +    S+A          W   +   H   
Sbjct: 598  GESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREASVA--------DAWTRRSRRRHRTS 649

Query: 479  LIIEMRGIVSKITIHR---EDHIEWNGEKRI-----KVCDIWESIRRTQLAPDWVSCVWH 324
            L+ E+  +++   IH    ED + W G+  +        D W  I+ T     W   VW 
Sbjct: 650  LLNEIEEMMAYQRIHHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWF 709

Query: 323  QWAIKNCSCFMWLAFKNRLLTKDRMI--NFGMNVSSTCLLCNNQPETSEHIFNSCSYSRL 150
            + A    +   WLA  NRL T DRM+  N   +VS  C+LC N  +T EH+F SCSY+  
Sbjct: 710  RHATPKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYAST 769

Query: 149  IMDEC-----PYQLTRNWNDYLRGNITIGHHKKKQQLAYLYLSIAICAIWRERN 3
            +           + +  W+  L    T    + +  L        I  +WRERN
Sbjct: 770  VWAALAKGIWKTRYSTRWSHLLTHISTHFQDRVEGFLTRYIFQATIYHVWRERN 823


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score =  118 bits (295), Expect = 2e-24
 Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 25/296 (8%)
 Frame = -2

Query: 815 LWRLAGNSNSIWISWFKAYVLRCNGLWTVR-ESRWHSWSIKNILKCRDMAQQYIKYKVGV 639
           +WR+  +S S+W+ W + Y+LR    W++   +   SW  K ILK R +A  ++K+ +  
Sbjct: 147 IWRML-SSTSLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHN 205

Query: 638 NSSYLLWHDPW--VGEPL--------INKFSAYIVSVAESTSMARVNSILQDQTWRLPAS 489
            S+   W D W  +G  +        I+       SVAE+    R      D   R+   
Sbjct: 206 GSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVVNHRPRRHRHDTLLRI--- 262

Query: 488 DHHLIIEMR--GIVSKITIHREDHIEWNGEKRI-KVC----DIWESIRRTQLAPDWVSCV 330
              +I E+R  G+ S      ED + W G   I K C    + W + R  +L  +W   V
Sbjct: 263 -EDVIAEVRHQGLTSG-----EDTVRWKGNGDIFKPCFNTKETWAATREPKLKVNWYKGV 316

Query: 329 WHQWAIKNCSCFMWLAFKNRLLTKDRMINFGMNVSSTCLLCNNQPETSEHIFNSCSYSRL 150
           W   A    S   W+A KNRL T DRM+++     S+C+LC++  ET +H+F +C YS  
Sbjct: 317 WFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYSAE 376

Query: 149 IMDECPYQL-----TRNWNDYLR--GNITIGHHKKKQQLAYLYLSIAICAIWRERN 3
           +      +L     T  W   L+   N ++GH  +   L      + + ++W+ERN
Sbjct: 377 VWSTLTRKLLSQHFTNRWEAILKLLTNKSLGH--EVPFLTRYTFQLTLHSLWKERN 430