BLASTX nr result

ID: Bupleurum21_contig00026371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026371
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519307.1| PREDICTED: medium-chain-fatty-acid--CoA liga...    89   3e-16
emb|CBI24031.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_003544953.1| PREDICTED: medium-chain-fatty-acid--CoA liga...    87   1e-15
ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus comm...    87   1e-15
ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA liga...    87   2e-15

>ref|XP_003519307.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
          Length = 549

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/61 (73%), Positives = 52/61 (85%)
 Frame = -3

Query: 422 KCKLEEKEIIEFCRSRLPHYTVPKTVVFMDELPKTSTGKIQKFVLREMAKKMGSTDTRSR 243
           K K  EK+IIE+CR  +PHY VPKTVVF DELPKTSTGKIQKFVLR++AK+MGS  T+SR
Sbjct: 490 KEKPTEKDIIEYCRDNMPHYMVPKTVVFKDELPKTSTGKIQKFVLRQIAKEMGSF-TQSR 548

Query: 242 M 240
           M
Sbjct: 549 M 549


>emb|CBI24031.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/53 (77%), Positives = 47/53 (88%)
 Frame = -3

Query: 407 EKEIIEFCRSRLPHYTVPKTVVFMDELPKTSTGKIQKFVLREMAKKMGSTDTR 249
           EKEI+E+CR+R+PHY VPKTVVF +ELPKTSTGKIQKFVLRE AK MGS+  R
Sbjct: 434 EKEIMEYCRARMPHYMVPKTVVFEEELPKTSTGKIQKFVLRETAKAMGSSRVR 486


>ref|XP_003544953.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
          Length = 554

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/61 (70%), Positives = 52/61 (85%)
 Frame = -3

Query: 422 KCKLEEKEIIEFCRSRLPHYTVPKTVVFMDELPKTSTGKIQKFVLREMAKKMGSTDTRSR 243
           K K  EKEIIE+CR  +PHY VP+TV+F DELPKTSTGKIQKFVLR++AK+MGS  T+SR
Sbjct: 495 KEKPTEKEIIEYCRDNMPHYMVPRTVIFKDELPKTSTGKIQKFVLRQIAKEMGSF-TQSR 553

Query: 242 M 240
           +
Sbjct: 554 I 554


>ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223538956|gb|EEF40553.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 556

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/62 (67%), Positives = 53/62 (85%)
 Frame = -3

Query: 425 AKCKLEEKEIIEFCRSRLPHYTVPKTVVFMDELPKTSTGKIQKFVLREMAKKMGSTDTRS 246
           A+ K+ EK+IIE+CR ++PHY VPKTVVF +ELPKTSTGKIQKFVLR++AK MG++   S
Sbjct: 496 AREKVSEKDIIEYCREKMPHYMVPKTVVFKEELPKTSTGKIQKFVLRDIAKAMGASKV-S 554

Query: 245 RM 240
           RM
Sbjct: 555 RM 556


>ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = -3

Query: 407 EKEIIEFCRSRLPHYTVPKTVVFMDELPKTSTGKIQKFVLREMAKKMGST 258
           EKEI+E+CR+R+PHY VPKTVVF +ELPKTSTGKIQKFVLRE AK MGS+
Sbjct: 534 EKEIMEYCRARMPHYMVPKTVVFEEELPKTSTGKIQKFVLRETAKAMGSS 583


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