BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026361
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531209.1| transcription initiation factor tfiid, putat...    99   6e-19
ref|XP_002276969.1| PREDICTED: transcription initiation factor T...    95   1e-17
ref|XP_002298845.1| predicted protein [Populus trichocarpa] gi|2...    93   4e-17
emb|CBI26708.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_003518649.1| PREDICTED: transcription initiation factor T...    85   2e-14

>ref|XP_002531209.1| transcription initiation factor tfiid, putative [Ricinus communis]
           gi|223529211|gb|EEF31186.1| transcription initiation
           factor tfiid, putative [Ricinus communis]
          Length = 468

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
 Frame = +2

Query: 2   RYEAWRVYGALLHAVGQYIYNXXXXXXXXXXXXXXXXXXVNAKIRTTIANKHKASTDDMM 181
           R+EAW VYGAL+ A G  +++                   + ++ TT+ NK KAS+D+++
Sbjct: 299 RHEAWSVYGALMRAAGLCMHDRMKRLPGVLMPPTRAVWKSSGRLMTTVPNKRKASSDNLI 358

Query: 182 QEPPSKRAATEGSMGVMTANSFPVNTQ-RTGVYXXXXXXXXXXXXXXXRKITTENV--LV 352
           Q+PP K+ AT+G MGV+  NS  V+ Q  TG Y               R++  EN+    
Sbjct: 359 QQPPLKKLATDGPMGVIPMNSMHVDMQGATGGYHTASGASGMSISSMSRQLPNENMPGRD 418

Query: 353 VDGRKNDPVKNTSSTRSWKEVTDAGQLLPLLTECFGESMHAYKPTPLSNIFL 508
           + GR +  +   +  R+WKE  DAG LL  L E FGESM  + P P  + FL
Sbjct: 419 ISGRVSKVLPVLA--RAWKEDMDAGHLLASLNELFGESMSCFAPKPELSFFL 468


>ref|XP_002276969.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Vitis vinifera]
          Length = 543

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 65/176 (36%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
 Frame = +2

Query: 2   RYEAWRVYGALLHAVGQYIYNXXXXXXXXXXXXXXXXXXVNAKIRTTIANKHKASTDDMM 181
           R+EAWRVYGALL A G  +Y+                   N KI  T  +K KASTD++M
Sbjct: 371 RHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAILKSNKKILPTKPSKRKASTDNLM 430

Query: 182 QEPPSKRAATEGSMGVMTANSFPVNTQ-RTGVY--XXXXXXXXXXXXXXXRKITTENVLV 352
           Q+PP K+ AT+GSMGVM  NS  V+ Q  TG +                 +++ +EN  +
Sbjct: 431 QQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTSTAVGSSDVGLSSMSQQLASEN--I 488

Query: 353 VDGRKNDPVKNTSST----RSWKEVTDAGQLLPLLTECFGESMHAYKPTPLSNIFL 508
             GR+    +   ++    ++WK+V +AGQL   L E FGESM  + P+P  ++FL
Sbjct: 489 SGGRREVGTRALKASAVLAQAWKDV-NAGQLSASLFEYFGESMFCFTPSPELSLFL 543


>ref|XP_002298845.1| predicted protein [Populus trichocarpa] gi|222846103|gb|EEE83650.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 57/169 (33%), Positives = 81/169 (47%)
 Frame = +2

Query: 2   RYEAWRVYGALLHAVGQYIYNXXXXXXXXXXXXXXXXXXVNAKIRTTIANKHKASTDDMM 181
           R+EAW+VYGAL  A G  +Y+                   N ++ T + NK KASTD++M
Sbjct: 375 RHEAWQVYGALTRAAGLCMYDRLKMLPGLFIPPSRAIWKSNGRVMTAMPNKRKASTDNLM 434

Query: 182 QEPPSKRAATEGSMGVMTANSFPVNTQRTGVYXXXXXXXXXXXXXXXRKITTENVLVVDG 361
           Q+P  K+ AT+ ++G M  NS PV  Q                    R+++ ENV   + 
Sbjct: 435 QQPLLKKIATDSAIGAMPMNSMPVEMQGAAT--------------ISRQLSNENVPRREI 480

Query: 362 RKNDPVKNTSSTRSWKEVTDAGQLLPLLTECFGESMHAYKPTPLSNIFL 508
                  +T   ++WKE  DAG LL  L E F ESM ++ P P  + FL
Sbjct: 481 SGRGLKTSTVLAQAWKEDMDAGHLLASLFELFSESMFSFTPKPELSFFL 529


>emb|CBI26708.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
 Frame = +2

Query: 2   RYEAWRVYGALLHAVGQYIYNXXXXXXXXXXXXXXXXXXVNAKIRTTIAN----KHKAST 169
           R+EAWRVYGALL A G  +Y+                   N KI  T       K KAST
Sbjct: 371 RHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAILKSNKKILPTKPKINPGKRKAST 430

Query: 170 DDMMQEPPSKRAATEGSMGVMTANSFPVNTQ-RTGVY--XXXXXXXXXXXXXXXRKITTE 340
           D++MQ+PP K+ AT+GSMGVM  NS  V+ Q  TG +                 +++ +E
Sbjct: 431 DNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTSTAVGSSDVGLSSMSQQLASE 490

Query: 341 NVLVVDGRKNDPVKNTSST----RSWKEVTDAGQLLPLLTECFGESMHAYKPTPLSNIFL 508
           N  +  GR+    +   ++    ++WK+V +AGQL   L E FGESM  + P+P  ++FL
Sbjct: 491 N--ISGGRREVGTRALKASAVLAQAWKDV-NAGQLSASLFEYFGESMFCFTPSPELSLFL 547


>ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Glycine max]
          Length = 544

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
 Frame = +2

Query: 2   RYEAWRVYGALLHAVGQYIYNXXXXXXXXXXXXXXXXXXVNAKIRTTIANKHKASTDDMM 181
           R+EAWRVYGALL A GQ IY+                   N+K+ T+   K KAS D + 
Sbjct: 371 RHEAWRVYGALLRAAGQCIYDRLKIFPTFPSPPLHAVWKTNSKVLTSSTYKRKASPDQLE 430

Query: 182 QEPPSKRAATEGSMGVMTANSFPVNTQRTGVYXXXXXXXXXXXXXXXRKITTENVL--VV 355
           Q+PP K+AAT+G +GV   N  PV+ Q                     ++  E  L   +
Sbjct: 431 QQPPLKKAATDGEVGVDLMNFSPVHKQEEAGTQASSADSIIGTSSSSAQMKNETTLDGEL 490

Query: 356 DGRKNDPVKNTSS---TRSWKEVTDAGQLLPLLTECFGESMHAYKPTPLSNIFL 508
            G++ D     +S   T+ WK+  ++G+ L  L E FGE + ++   P   +FL
Sbjct: 491 RGKRGDTQALKTSAALTQVWKDELNSGRTLVSLFELFGEGILSFIKAPEMYMFL 544