BLASTX nr result

ID: Bupleurum21_contig00026358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026358
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]...   164   5e-39
ref|XP_002330186.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
gb|AFK39265.1| unknown [Medicago truncatula]                          147   9e-34
ref|XP_003591200.1| hypothetical protein MTR_1g083820 [Medicago ...   147   9e-34
ref|XP_003591198.1| hypothetical protein MTR_1g083820 [Medicago ...   147   9e-34

>ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223548450|gb|EEF49941.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 570

 Score =  164 bits (416), Expect = 5e-39
 Identities = 90/140 (64%), Positives = 107/140 (76%), Gaps = 8/140 (5%)
 Frame = +2

Query: 2   LAKEAGYFEKVEELCDRYSLEGYANVEELQESLQNTRFFSLDELAVDDIIWVDDVSGLQA 181
           LA EAGY EKV+ELCDRYSLEG+   +EL ESL + RF  L+E AV+DI+WVD+V GL  
Sbjct: 305 LAMEAGYSEKVDELCDRYSLEGFLKGKEL-ESLPHGRFLQLNEFAVEDIVWVDEVDGLCG 363

Query: 182 ATCHIEGCTVVGIDSE-------GIKP-QVCIMQIASEKMVYILDLIKLFKDVPVVLDSY 337
           AT HIEGC VVG+D E       G KP +V IMQIAS+KMV+I DLIKLF+DVP  LD+ 
Sbjct: 364 ATGHIEGCKVVGLDCEWKPNFEKGSKPNKVSIMQIASDKMVFIFDLIKLFEDVPDTLDNC 423

Query: 338 LTRIFRSPKILKLGYDFQGD 397
           LTRI +SP+ILKLGY+FQ D
Sbjct: 424 LTRILQSPRILKLGYNFQCD 443


>ref|XP_002330186.1| predicted protein [Populus trichocarpa] gi|222871642|gb|EEF08773.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  160 bits (405), Expect = 1e-37
 Identities = 84/140 (60%), Positives = 108/140 (77%), Gaps = 8/140 (5%)
 Frame = +2

Query: 2   LAKEAGYFEKVEELCDRYSLEGYANVEELQESLQNTRFFSLDELAVDDIIWVDDVSGLQA 181
           LA EA Y EKV+ELC+RYSLEG+ NV+E + S+  +++  LDELAV++IIWVD+V GL A
Sbjct: 308 LAMEACYSEKVDELCERYSLEGFLNVKESEGSVLQSKYLHLDELAVENIIWVDEVDGLCA 367

Query: 182 ATCHIEGCTVVGIDSE-------GIKP-QVCIMQIASEKMVYILDLIKLFKDVPVVLDSY 337
           A  HIEGC VVG+D E       G KP +V IMQIAS+K V+I DLIKLF+D+P +LD+ 
Sbjct: 368 AISHIEGCKVVGLDCEWKPNYVKGSKPNKVSIMQIASDKTVFIFDLIKLFEDIPDILDNC 427

Query: 338 LTRIFRSPKILKLGYDFQGD 397
           L+RI +SP+ILKLGY+FQ D
Sbjct: 428 LSRILQSPRILKLGYNFQCD 447


>gb|AFK39265.1| unknown [Medicago truncatula]
          Length = 553

 Score =  147 bits (371), Expect = 9e-34
 Identities = 80/140 (57%), Positives = 99/140 (70%), Gaps = 8/140 (5%)
 Frame = +2

Query: 2   LAKEAGYFEKVEELCDRYSLEGYANVEELQESLQNTRFFSLDELAVDDIIWVDDVSGLQA 181
           LA EAGY EKV+ELC+RYSL+ + +++ L+ S+    +  L+EL V+DIIWVDDV GL  
Sbjct: 305 LAMEAGYMEKVDELCERYSLDRFLDIKVLETSIPQGNYLHLEELMVEDIIWVDDVEGLLD 364

Query: 182 ATCHIEGCTVVGIDSE-------GIKP-QVCIMQIASEKMVYILDLIKLFKDVPVVLDSY 337
           ATC IE   V+G+D E       G KP +V IMQIASEK  +ILDLIKL ++VP  LDS 
Sbjct: 365 ATCQIEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKKAFILDLIKLHREVPERLDSC 424

Query: 338 LTRIFRSPKILKLGYDFQGD 397
           LTRI  SP ILKLGY+FQ D
Sbjct: 425 LTRILLSPGILKLGYNFQCD 444


>ref|XP_003591200.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
           gi|355480248|gb|AES61451.1| hypothetical protein
           MTR_1g083820 [Medicago truncatula]
          Length = 519

 Score =  147 bits (371), Expect = 9e-34
 Identities = 80/140 (57%), Positives = 99/140 (70%), Gaps = 8/140 (5%)
 Frame = +2

Query: 2   LAKEAGYFEKVEELCDRYSLEGYANVEELQESLQNTRFFSLDELAVDDIIWVDDVSGLQA 181
           LA EAGY EKV+ELC+RYSL+ + +++ L+ S+    +  L+EL V+DIIWVDDV GL  
Sbjct: 271 LAMEAGYMEKVDELCERYSLDRFLDIKVLETSIPQGNYLHLEELMVEDIIWVDDVEGLLD 330

Query: 182 ATCHIEGCTVVGIDSE-------GIKP-QVCIMQIASEKMVYILDLIKLFKDVPVVLDSY 337
           ATC IE   V+G+D E       G KP +V IMQIASEK  +ILDLIKL ++VP  LDS 
Sbjct: 331 ATCQIEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKKAFILDLIKLHREVPERLDSC 390

Query: 338 LTRIFRSPKILKLGYDFQGD 397
           LTRI  SP ILKLGY+FQ D
Sbjct: 391 LTRILLSPGILKLGYNFQCD 410


>ref|XP_003591198.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
           gi|355480246|gb|AES61449.1| hypothetical protein
           MTR_1g083820 [Medicago truncatula]
          Length = 553

 Score =  147 bits (371), Expect = 9e-34
 Identities = 80/140 (57%), Positives = 99/140 (70%), Gaps = 8/140 (5%)
 Frame = +2

Query: 2   LAKEAGYFEKVEELCDRYSLEGYANVEELQESLQNTRFFSLDELAVDDIIWVDDVSGLQA 181
           LA EAGY EKV+ELC+RYSL+ + +++ L+ S+    +  L+EL V+DIIWVDDV GL  
Sbjct: 305 LAMEAGYMEKVDELCERYSLDRFLDIKVLETSIPQGNYLHLEELMVEDIIWVDDVEGLLD 364

Query: 182 ATCHIEGCTVVGIDSE-------GIKP-QVCIMQIASEKMVYILDLIKLFKDVPVVLDSY 337
           ATC IE   V+G+D E       G KP +V IMQIASEK  +ILDLIKL ++VP  LDS 
Sbjct: 365 ATCQIEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKKAFILDLIKLHREVPERLDSC 424

Query: 338 LTRIFRSPKILKLGYDFQGD 397
           LTRI  SP ILKLGY+FQ D
Sbjct: 425 LTRILLSPGILKLGYNFQCD 444


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