BLASTX nr result

ID: Bupleurum21_contig00026349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026349
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan pr...   222   2e-56
dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hy...   222   2e-56
emb|CAN65447.1| hypothetical protein VITISV_011425 [Vitis vinifera]   222   2e-56
ref|XP_002511740.1| conserved hypothetical protein [Ricinus comm...   218   5e-55
ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54

>ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan protein 10-like [Vitis
           vinifera]
          Length = 416

 Score =  222 bits (566), Expect = 2e-56
 Identities = 113/161 (70%), Positives = 130/161 (80%), Gaps = 2/161 (1%)
 Frame = -2

Query: 479 GNAQNKIGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEISTXXXXXXX 300
           GNA   +GFVNITDLKGG+VGFGS   GSKLDSSYTK +KQ+PYN SV+EIS        
Sbjct: 113 GNAPGNLGFVNITDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGL 172

Query: 299 XXXXP--SSDLNITALLEKAGCKTFAGLLLSTGVLKTYQSAITKGLTVFAPNDEAFKAKG 126
                  +SD+NIT LLEKAGCKTFA LL+STGV+K Y+SA+ KGLTVFAPNDEAFKA G
Sbjct: 173 LTAPAPSASDVNITGLLEKAGCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADG 232

Query: 125 LPDLSKLTNAELVALLQYHALPSYTPIGSLKSSKAPISTLA 3
           +PDL+KLTNAELV LLQYHA+ +Y+PIGSLK+SK PISTLA
Sbjct: 233 VPDLTKLTNAELVTLLQYHAVAAYSPIGSLKTSKDPISTLA 273


>dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hybrid cultivar]
          Length = 416

 Score =  222 bits (566), Expect = 2e-56
 Identities = 113/161 (70%), Positives = 130/161 (80%), Gaps = 2/161 (1%)
 Frame = -2

Query: 479 GNAQNKIGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEISTXXXXXXX 300
           GNA   +GFVNITDLKGG+VGFGS   GSKLDSSYTK +KQ+PYN SV+EIS        
Sbjct: 113 GNAPGNLGFVNITDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGL 172

Query: 299 XXXXP--SSDLNITALLEKAGCKTFAGLLLSTGVLKTYQSAITKGLTVFAPNDEAFKAKG 126
                  +SD+NIT LLEKAGCKTFA LL+STGV+K Y+SA+ KGLTVFAPNDEAFKA G
Sbjct: 173 LTAPAPSASDVNITGLLEKAGCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADG 232

Query: 125 LPDLSKLTNAELVALLQYHALPSYTPIGSLKSSKAPISTLA 3
           +PDL+KLTNAELV LLQYHA+ +Y+PIGSLK+SK PISTLA
Sbjct: 233 VPDLTKLTNAELVTLLQYHAVAAYSPIGSLKTSKDPISTLA 273


>emb|CAN65447.1| hypothetical protein VITISV_011425 [Vitis vinifera]
          Length = 416

 Score =  222 bits (566), Expect = 2e-56
 Identities = 113/161 (70%), Positives = 130/161 (80%), Gaps = 2/161 (1%)
 Frame = -2

Query: 479 GNAQNKIGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEISTXXXXXXX 300
           GNA   +GFVNITDLKGG+VGFGS   GSKLDSSYTK +KQ+PYN SV+EIS        
Sbjct: 113 GNAPGNLGFVNITDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGL 172

Query: 299 XXXXP--SSDLNITALLEKAGCKTFAGLLLSTGVLKTYQSAITKGLTVFAPNDEAFKAKG 126
                  +SD+NIT LLEKAGCKTFA LL+STGV+K Y+SA+ KGLTVFAPNDEAFKA G
Sbjct: 173 LTAPAPSASDVNITGLLEKAGCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADG 232

Query: 125 LPDLSKLTNAELVALLQYHALPSYTPIGSLKSSKAPISTLA 3
           +PDL+KLTNAELV LLQYHA+ +Y+PIGSLK+SK PISTLA
Sbjct: 233 VPDLTKLTNAELVTLLQYHAVAAYSPIGSLKTSKDPISTLA 273


>ref|XP_002511740.1| conserved hypothetical protein [Ricinus communis]
           gi|223548920|gb|EEF50409.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  218 bits (554), Expect = 5e-55
 Identities = 111/161 (68%), Positives = 128/161 (79%), Gaps = 2/161 (1%)
 Frame = -2

Query: 479 GNAQNKIGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEISTXXXXXXX 300
           GNA   +GFVNITDL+GG+VGFGS   GSKLDSSYTK +KQ+PYN SV+E+S        
Sbjct: 116 GNAPGNLGFVNITDLQGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVIEVSAPIVAPGI 175

Query: 299 XXXXPSS--DLNITALLEKAGCKTFAGLLLSTGVLKTYQSAITKGLTVFAPNDEAFKAKG 126
                 S  D+NIT LLEKAGCKTFAGLLLS+GVLKTYQSA  KGLT+FAPNDEAFKA G
Sbjct: 176 FTAPAPSPSDVNITGLLEKAGCKTFAGLLLSSGVLKTYQSAADKGLTIFAPNDEAFKAAG 235

Query: 125 LPDLSKLTNAELVALLQYHALPSYTPIGSLKSSKAPISTLA 3
           +PDLSKL+NAELV+LL+YHA   Y+P G+LK+SK PISTLA
Sbjct: 236 VPDLSKLSNAELVSLLEYHASVGYSPKGALKTSKDPISTLA 276


>ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|222861509|gb|EEE99051.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  215 bits (547), Expect = 3e-54
 Identities = 110/161 (68%), Positives = 127/161 (78%), Gaps = 2/161 (1%)
 Frame = -2

Query: 479 GNAQNKIGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEISTXXXXXXX 300
           GNA   +GFVNITDL+GG+VGFGS   GSKLDSSYTK +KQVPYN S++EIS        
Sbjct: 116 GNAPGNLGFVNITDLQGGKVGFGSAAPGSKLDSSYTKSVKQVPYNISILEISQPIIAPGI 175

Query: 299 XXXXPS--SDLNITALLEKAGCKTFAGLLLSTGVLKTYQSAITKGLTVFAPNDEAFKAKG 126
                   S +NITALLEKAGCKTFA LL ++GV+KTYQSA  KGLT+FAPNDEAFKA G
Sbjct: 176 LTAPAPTPSSVNITALLEKAGCKTFASLLQTSGVIKTYQSAADKGLTIFAPNDEAFKAAG 235

Query: 125 LPDLSKLTNAELVALLQYHALPSYTPIGSLKSSKAPISTLA 3
           +PDLSKLTNAE+V+LLQYHA  +Y+P GSLK+SK PISTLA
Sbjct: 236 VPDLSKLTNAEIVSLLQYHATATYSPFGSLKTSKDPISTLA 276


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