BLASTX nr result

ID: Bupleurum21_contig00026333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026333
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274464.1| PREDICTED: uncharacterized protein LOC100256...    90   2e-16
emb|CBI27218.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|NP_172069.1| vacuolar ATPase assembly integral membrane prot...    85   5e-15
ref|XP_002881191.1| hypothetical protein ARALYDRAFT_344930 [Arab...    85   5e-15
ref|NP_565728.1| Vacuolar ATPase assembly integral membrane prot...    84   1e-14

>ref|XP_002274464.1| PREDICTED: uncharacterized protein LOC100256132 [Vitis vinifera]
          Length = 106

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/90 (50%), Positives = 53/90 (58%)
 Frame = +1

Query: 1   SMFMWIVPVAILYGFNHGXXXXXXXXXXXXXXXXXXXXAVLSVNVVIIFYICLAMREPMQ 180
           SM MWI P+AILYGFNH                     AV+SVN+VI FYI +AM+EP  
Sbjct: 12  SMLMWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAFYIFMAMKEPSD 71

Query: 181 KHEPDPKFLSEANASVKQFKTEETAEPSST 270
           KHEPDP FL+ A ASV Q    ET +PS +
Sbjct: 72  KHEPDPAFLAAAKASVSQSTPGETEDPSQS 101


>emb|CBI27218.3| unnamed protein product [Vitis vinifera]
          Length = 92

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/87 (49%), Positives = 51/87 (58%)
 Frame = +1

Query: 10  MWIVPVAILYGFNHGXXXXXXXXXXXXXXXXXXXXAVLSVNVVIIFYICLAMREPMQKHE 189
           MWI P+AILYGFNH                     AV+SVN+VI FYI +AM+EP  KHE
Sbjct: 1   MWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAFYIFMAMKEPSDKHE 60

Query: 190 PDPKFLSEANASVKQFKTEETAEPSST 270
           PDP FL+ A ASV Q    ET +PS +
Sbjct: 61  PDPAFLAAAKASVSQSTPGETEDPSQS 87


>ref|NP_172069.1| vacuolar ATPase assembly integral membrane protein VMA21-like
           domain-containing protein [Arabidopsis thaliana]
           gi|61742516|gb|AAX55079.1| hypothetical protein
           At1g05780 [Arabidopsis thaliana]
           gi|332189769|gb|AEE27890.1| vacuolar ATPase assembly
           integral membrane protein VMA21-like domain-containing
           protein [Arabidopsis thaliana]
          Length = 106

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/85 (49%), Positives = 51/85 (60%)
 Frame = +1

Query: 1   SMFMWIVPVAILYGFNHGXXXXXXXXXXXXXXXXXXXXAVLSVNVVIIFYICLAMREPMQ 180
           SMFMWI+PVAILYGFNH                     AV+SVN VI+FYIC+AM+EP  
Sbjct: 12  SMFMWILPVAILYGFNHNLLPGSTTLSPHSLILLSGFLAVVSVNTVIVFYICMAMKEPAD 71

Query: 181 KHEPDPKFLSEANASVKQFKTEETA 255
           KH+PD  FL+EA  SV +     T+
Sbjct: 72  KHKPDAAFLAEAKDSVNKLTKGATS 96


>ref|XP_002881191.1| hypothetical protein ARALYDRAFT_344930 [Arabidopsis lyrata subsp.
           lyrata] gi|297327030|gb|EFH57450.1| hypothetical protein
           ARALYDRAFT_344930 [Arabidopsis lyrata subsp. lyrata]
          Length = 105

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/85 (48%), Positives = 55/85 (64%)
 Frame = +1

Query: 1   SMFMWIVPVAILYGFNHGXXXXXXXXXXXXXXXXXXXXAVLSVNVVIIFYICLAMREPMQ 180
           SMFMWI+P+AILYGFN+                     AV+SVNVVI+FYICLA++EP+ 
Sbjct: 12  SMFMWILPIAILYGFNNDLLPGSTTLSPHSLTLLSGFLAVVSVNVVIVFYICLALKEPVD 71

Query: 181 KHEPDPKFLSEANASVKQFKTEETA 255
           KH+PD  F++EA  SVK+  +  T+
Sbjct: 72  KHKPDASFVAEAKDSVKKLTSGVTS 96


>ref|NP_565728.1| Vacuolar ATPase assembly integral membrane protein VMA21-like
           domain [Arabidopsis thaliana] gi|20198067|gb|AAD24847.2|
           expressed protein [Arabidopsis thaliana]
           gi|21594831|gb|AAM66048.1| unknown [Arabidopsis
           thaliana] gi|88011071|gb|ABD38898.1| At2g31710
           [Arabidopsis thaliana] gi|330253481|gb|AEC08575.1|
           Vacuolar ATPase assembly integral membrane protein
           VMA21-like domain protein [Arabidopsis thaliana]
          Length = 105

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/84 (48%), Positives = 53/84 (63%)
 Frame = +1

Query: 1   SMFMWIVPVAILYGFNHGXXXXXXXXXXXXXXXXXXXXAVLSVNVVIIFYICLAMREPMQ 180
           SMFMWI+P+AILYGFN+                     AV+SVNVVI+FYICLA++EP  
Sbjct: 12  SMFMWILPIAILYGFNNDLLPGSTTLSPHSLTLLSGFLAVVSVNVVIVFYICLALKEPAD 71

Query: 181 KHEPDPKFLSEANASVKQFKTEET 252
           KH+PD  F++EA  SVK+  +  T
Sbjct: 72  KHKPDASFVAEAKDSVKKLTSGVT 95


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