BLASTX nr result

ID: Bupleurum21_contig00026303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026303
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15555.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_003634285.1| PREDICTED: uncharacterized protein LOC100854...    74   9e-12
emb|CAN76042.1| hypothetical protein VITISV_002169 [Vitis vinifera]    73   2e-11
ref|XP_002318523.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_003631089.1| CTR2 protein kinase [Medicago truncatula] gi...    68   7e-10

>emb|CBI15555.3| unnamed protein product [Vitis vinifera]
          Length = 898

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
 Frame = -3

Query: 275 MNFVRINDDREYIVDLMADPGTLIPSDIVGSHIEFEKS-FQTALLA--VEPTLVDAFSEG 105
           MNFV+I D REYIVDLMADPGTLIPSD  GSHIE++ S F  + L+  ++ + + + S G
Sbjct: 335 MNFVKIEDGREYIVDLMADPGTLIPSDAAGSHIEYDDSIFSASTLSREIDSSYIASSSSG 394

Query: 104 VNTTSEDGPGVNNLHDVGRISVERNEPLPSVDML 3
           V        G N   D G ++   N P PS D L
Sbjct: 395 VVRPYLSAVG-NESDDRGELTACANLPRPSKDSL 427


>ref|XP_003634285.1| PREDICTED: uncharacterized protein LOC100854850 [Vitis vinifera]
          Length = 1033

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
 Frame = -3

Query: 275 MNFVRINDDREYIVDLMADPGTLIPSDIVGSHIEFEKS-FQTALLA--VEPTLVDAFSEG 105
           MNFV+I D REYIVDLMADPGTLIPSD  GSHIE++ S F  + L+  ++ + + + S G
Sbjct: 335 MNFVKIEDGREYIVDLMADPGTLIPSDAAGSHIEYDDSIFSASTLSREIDSSYIASSSSG 394

Query: 104 VNTTSEDGPGVNNLHDVGRISVERNEPLPSVDML 3
           V        G N   D G ++   N P PS D L
Sbjct: 395 VVRPYLSAVG-NESDDRGELTACANLPRPSKDSL 427


>emb|CAN76042.1| hypothetical protein VITISV_002169 [Vitis vinifera]
          Length = 1058

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
 Frame = -3

Query: 275 MNFVRINDDREYIVDLMADPGTLIPSDIVGSHIEFEKS-FQTALLA--VEPTLVDAFSEG 105
           MNFV+I D REYIVDLMADPGTLIPSD  GSHIE++ S F  + L+  ++ + + + S G
Sbjct: 360 MNFVKIEDGREYIVDLMADPGTLIPSDAAGSHIEYDDSIFSASTLSREIDSSYIASSSSG 419

Query: 104 VNTTSEDGPGVNNLHDVGRISVERNEPLPSVD 9
           V        G N   D G ++   N P PS D
Sbjct: 420 VVRPYLSAVG-NESDDRGELTACANLPRPSKD 450


>ref|XP_002318523.1| predicted protein [Populus trichocarpa] gi|222859196|gb|EEE96743.1|
           predicted protein [Populus trichocarpa]
          Length = 946

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
 Frame = -3

Query: 275 MNFVRINDDREYIVDLMADPGTLIPSDIVGSHIEFEKSFQTA---LLAVEPTLVDAFSEG 105
           MNFV+I+D REYIVDL ADPGTLIPSD  GSHIE++ SF ++      ++   + + S G
Sbjct: 302 MNFVKIDDGREYIVDLTADPGTLIPSDAAGSHIEYDDSFFSSSPFSRDIDSYRIASSSSG 361

Query: 104 VNTTSEDGPGVN-----------NLHDVGRISVERNEPL 21
             + S +G  +            +L+D G+IS+    P+
Sbjct: 362 HTSDSHEGASLTKLSKGEEESTISLNDFGKISIAEKVPV 400


>ref|XP_003631089.1| CTR2 protein kinase [Medicago truncatula]
           gi|355525111|gb|AET05565.1| CTR2 protein kinase
           [Medicago truncatula]
          Length = 1011

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
 Frame = -3

Query: 275 MNFVRINDDREYIVDLMADPGTLIPSDIVGSHIEFEKSFQTALLA---VEPTLVDAFSEG 105
           MNFV+I++ REYIVDLMA PGTLIPSD  GSHIE++ S   A  +   ++ + + +FS G
Sbjct: 314 MNFVKIDEGREYIVDLMAAPGTLIPSDAAGSHIEYDDSSFVASPSSRDLDSSHITSFSSG 373

Query: 104 VNTTSED 84
           V ++SE+
Sbjct: 374 VGSSSEE 380


Top