BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026269
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   161   6e-38
ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-li...   159   2e-37
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   159   3e-37
ref|NP_177871.1| replication factor C subunit 3 [Arabidopsis tha...   154   5e-36

>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
           gi|302141794|emb|CBI18997.3| unnamed protein product
           [Vitis vinifera]
          Length = 360

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/84 (91%), Positives = 81/84 (96%)
 Frame = +3

Query: 117 KSTPWVEKYRPQSLADVAAHRDIVDTIDRLTSEKKLPHLLLYGPPGTGKTSTILAVARKL 296
           K+TPWVEKYRPQSLADVAAHRDIVDTIDRLTSE +LPHLLLYGPPGTGKTSTILAVARKL
Sbjct: 35  KATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 94

Query: 297 FGSQMHNMVLELNASDDRGIDVVR 368
           +G Q HNM+LELNASDDRGIDVVR
Sbjct: 95  YGEQFHNMILELNASDDRGIDVVR 118


>ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|222843952|gb|EEE81499.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/84 (90%), Positives = 82/84 (97%)
 Frame = +3

Query: 117 KSTPWVEKYRPQSLADVAAHRDIVDTIDRLTSEKKLPHLLLYGPPGTGKTSTILAVARKL 296
           K+TPWVEKYRPQSLADVAAHRDI+DTIDRLTSE +LPHLLLYGPPGTGKTSTILAVARKL
Sbjct: 38  KATPWVEKYRPQSLADVAAHRDIIDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 97

Query: 297 FGSQMHNMVLELNASDDRGIDVVR 368
           +G+Q HNM+LELNASDDRGIDVVR
Sbjct: 98  YGAQYHNMILELNASDDRGIDVVR 121


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 361

 Score =  159 bits (402), Expect = 2e-37
 Identities = 83/119 (69%), Positives = 90/119 (75%), Gaps = 12/119 (10%)
 Frame = +3

Query: 48  MAGEMCPMETDD------------VIFADGDQRHAKSTPWVEKYRPQSLADVAAHRDIVD 191
           MA    PM+ DD            V+FA       K+ PWVEKYRPQSL DVAAHRDIVD
Sbjct: 1   MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60

Query: 192 TIDRLTSEKKLPHLLLYGPPGTGKTSTILAVARKLFGSQMHNMVLELNASDDRGIDVVR 368
           TIDRLT+E +LPHLLLYGPPGTGKTSTILAVARKL+GSQ  NM+LELNASDDRGIDVVR
Sbjct: 61  TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVR 119


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540562|gb|EEF42129.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 360

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/84 (90%), Positives = 81/84 (96%)
 Frame = +3

Query: 117 KSTPWVEKYRPQSLADVAAHRDIVDTIDRLTSEKKLPHLLLYGPPGTGKTSTILAVARKL 296
           K+TPWVEKYRPQSLADVAAHRDIVDTIDRLT+E +LPHLLLYGPPGTGKTSTILAVARKL
Sbjct: 35  KATPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKL 94

Query: 297 FGSQMHNMVLELNASDDRGIDVVR 368
           +G Q HNM+LELNASDDRGIDVVR
Sbjct: 95  YGVQYHNMILELNASDDRGIDVVR 118


>ref|NP_177871.1| replication factor C subunit 3 [Arabidopsis thaliana]
           gi|12323400|gb|AAG51681.1|AC010704_25 putative
           replication factor C; 24844-22715 [Arabidopsis thaliana]
           gi|17529332|gb|AAL38893.1| putative replication factor C
           [Arabidopsis thaliana] gi|21436375|gb|AAM51357.1|
           putative replication factor C [Arabidopsis thaliana]
           gi|332197861|gb|AEE35982.1| replication factor C subunit
           3 [Arabidopsis thaliana]
          Length = 369

 Score =  154 bits (390), Expect = 5e-36
 Identities = 75/101 (74%), Positives = 84/101 (83%)
 Frame = +3

Query: 66  PMETDDVIFADGDQRHAKSTPWVEKYRPQSLADVAAHRDIVDTIDRLTSEKKLPHLLLYG 245
           P+     +   G    +K+TPWVEKYRPQSL DVAAHRDI+DTIDRLT+E KLPHLLLYG
Sbjct: 20  PINKGKDVVGFGPPPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYG 79

Query: 246 PPGTGKTSTILAVARKLFGSQMHNMVLELNASDDRGIDVVR 368
           PPGTGKTSTILAVARKL+G +  NM+LELNASDDRGIDVVR
Sbjct: 80  PPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVR 120