BLASTX nr result

ID: Bupleurum21_contig00026260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026260
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279191.1| PREDICTED: putative auxin efflux carrier com...   429   e-118
ref|XP_002512623.1| conserved hypothetical protein [Ricinus comm...   422   e-116
ref|NP_197157.4| putative auxin efflux carrier component 8 [Arab...   416   e-114
ref|XP_002329004.1| auxin efflux carrier component [Populus tric...   412   e-113
ref|XP_002871722.1| hypothetical protein ARALYDRAFT_326097 [Arab...   410   e-112

>ref|XP_002279191.1| PREDICTED: putative auxin efflux carrier component 8 [Vitis vinifera]
            gi|297735290|emb|CBI17652.3| unnamed protein product
            [Vitis vinifera]
          Length = 356

 Score =  429 bits (1104), Expect = e-118
 Identities = 225/357 (63%), Positives = 254/357 (71%)
 Frame = +1

Query: 76   MIGIEDIYKVIVATAPLYVALMLGYGSVKWWHIFTNEQCDAINLLVCYITLPLFTFEFTA 255
            MIG ED+YKV+VA  PLYVAL+LGYGSVKWW IFT +QCDAIN LVCY TLPLFTFEFTA
Sbjct: 1    MIGWEDVYKVVVAMLPLYVALVLGYGSVKWWRIFTPDQCDAINRLVCYFTLPLFTFEFTA 60

Query: 256  NVDPFNWNFVLIGADAISKVIIVGVLILWAKFSSKGSYGWXXXXXXXXXXXXXXVVGVPM 435
            +VDPF  N++ IGADA+SK+IIV VL LWAK SSKGSY W              VVGVP+
Sbjct: 61   HVDPFKMNYLFIGADAVSKLIIVLVLALWAKCSSKGSYCWSITSFSLATLTNSLVVGVPL 120

Query: 436  IQAMYGSSAVDLVVQLSVIQAIIWXXXXXXXXXXXXXXIDCMESEMEDRDLEXXXXXXXX 615
            I+AMYG   VDLVVQ SV+QAIIW                 + S     D          
Sbjct: 121  IKAMYGPLGVDLVVQSSVVQAIIWLTLLLFVLEFRRTGTG-ISSNTTMGDSGVIEVEPGK 179

Query: 616  XXXXXXXEVVAGPSFCVVMMKVWLKLAMNPNAYACIVGITWALVANRWHLQMPSILEGSI 795
                    V    SF  +M KVWLKLA NPN+YACI+GI WA +ANRWH +MPSI+EGSI
Sbjct: 180  DLETNEMVVSTRLSFWSLMRKVWLKLAQNPNSYACIIGIVWAFIANRWHFEMPSIMEGSI 239

Query: 796  LIMSRAGTGTAMFSMGLFMAKQKKIIACGSSLTAFGMVLKFXXXXXXXXXXXXXXXLHGD 975
            LIMSRAGTGTAMFSMGLFMA Q+KIIACG++LT FGMVL+F               LHGD
Sbjct: 240  LIMSRAGTGTAMFSMGLFMAMQEKIIACGTTLTVFGMVLRFIAGPAAMAIGAIAVGLHGD 299

Query: 976  VLRVAIIQAALPQSITSFIYAKEYGLHADVLSTAVIFGMIVSFPVLIGYYAILAFLH 1146
            VLR+AIIQAA+PQSITSFIYAKEYGLHADVLSTAVIFGMIVS P+L+GYYA+L FL+
Sbjct: 300  VLRIAIIQAAVPQSITSFIYAKEYGLHADVLSTAVIFGMIVSLPLLVGYYAVLEFLN 356


>ref|XP_002512623.1| conserved hypothetical protein [Ricinus communis]
            gi|223548584|gb|EEF50075.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 357

 Score =  422 bits (1086), Expect = e-116
 Identities = 219/357 (61%), Positives = 250/357 (70%)
 Frame = +1

Query: 76   MIGIEDIYKVIVATAPLYVALMLGYGSVKWWHIFTNEQCDAINLLVCYITLPLFTFEFTA 255
            MIG ED+YKVIVA  PLYVAL+LGYGS++WW IFT EQ  A+N LVCY TLPLFTFEFTA
Sbjct: 1    MIGWEDVYKVIVAMVPLYVALLLGYGSIRWWKIFTPEQGGAVNRLVCYFTLPLFTFEFTA 60

Query: 256  NVDPFNWNFVLIGADAISKVIIVGVLILWAKFSSKGSYGWXXXXXXXXXXXXXXVVGVPM 435
            +VDPF  N++ IGADAISK IIV VL  WAKFSSKGSY W              VVGVP+
Sbjct: 61   HVDPFKMNYLFIGADAISKFIIVVVLACWAKFSSKGSYTWSITSFSLSTLTNSLVVGVPL 120

Query: 436  IQAMYGSSAVDLVVQLSVIQAIIWXXXXXXXXXXXXXXIDCMESEMEDRDLEXXXXXXXX 615
            ++AMYG  AVDLVVQ SV+QAIIW              +D   S                
Sbjct: 121  MKAMYGPMAVDLVVQSSVVQAIIWLTILLFVLEFRRTRLDISSSNYNKNSDNLEKDLEGS 180

Query: 616  XXXXXXXEVVAGPSFCVVMMKVWLKLAMNPNAYACIVGITWALVANRWHLQMPSILEGSI 795
                      +GPSF V+M  V +KLAMNPN+YACI+G+ WA +ANRWH +MPSI+EGSI
Sbjct: 181  GSAGNMAISSSGPSFWVLMKVVGVKLAMNPNSYACILGLVWAFIANRWHFEMPSIMEGSI 240

Query: 796  LIMSRAGTGTAMFSMGLFMAKQKKIIACGSSLTAFGMVLKFXXXXXXXXXXXXXXXLHGD 975
            LIMS+AGTGTAMFSMG+FMA Q+K+IACG+ LT  GM+L+F               LHGD
Sbjct: 241  LIMSKAGTGTAMFSMGIFMAVQEKVIACGAGLTVVGMILRFIAGPAAMAIGSIAVGLHGD 300

Query: 976  VLRVAIIQAALPQSITSFIYAKEYGLHADVLSTAVIFGMIVSFPVLIGYYAILAFLH 1146
            VLRVAIIQAALPQSITSFI+AKEYGLHA+VLSTAVIFGMIVS PVLI YYAIL F H
Sbjct: 301  VLRVAIIQAALPQSITSFIFAKEYGLHAEVLSTAVIFGMIVSLPVLIAYYAILEFAH 357


>ref|NP_197157.4| putative auxin efflux carrier component 8 [Arabidopsis thaliana]
            gi|42558880|sp|Q9FFD0.2|PIN8_ARATH RecName: Full=Putative
            auxin efflux carrier component 8; Short=AtPIN8
            gi|332004922|gb|AED92305.1| putative auxin efflux carrier
            component 8 [Arabidopsis thaliana]
          Length = 351

 Score =  416 bits (1068), Expect = e-114
 Identities = 215/358 (60%), Positives = 248/358 (69%), Gaps = 1/358 (0%)
 Frame = +1

Query: 76   MIGIEDIYKVIVATAPLYVALMLGYGSVKWWHIFTNEQCDAINLLVCYITLPLFTFEFTA 255
            MI   D+YKVI A  PLYVAL+LGYGSVKWWHIFT +QCDAIN LVCY TLPLFT EFTA
Sbjct: 1    MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60

Query: 256  NVDPFNWNFVLIGADAISKVIIVGVLILWAKFSSKGSYGWXXXXXXXXXXXXXXVVGVPM 435
            +VDPFN N+  I AD +SKVIIV VL LWAK+S+KGSY W              VVGVP+
Sbjct: 61   HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query: 436  IQAMYGSSAVDLVVQLSVIQAIIWXXXXXXXXXXXXXXIDCMESEMEDRDLEXXXXXXXX 615
             +AMYG  AVDLVVQ SV QAI+W              ++  ++     ++         
Sbjct: 121  AKAMYGQQAVDLVVQSSVFQAIVW-------LTLLLFVLEFRKAGFSSNNISDVQVDNIN 173

Query: 616  XXXXXXXEVVAG-PSFCVVMMKVWLKLAMNPNAYACIVGITWALVANRWHLQMPSILEGS 792
                    VV G  SF  VM  VWLKLA NPN Y+CI+GI WA ++NRWHL++P ILEGS
Sbjct: 174  IESGKRETVVVGEKSFLEVMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPGILEGS 233

Query: 793  ILIMSRAGTGTAMFSMGLFMAKQKKIIACGSSLTAFGMVLKFXXXXXXXXXXXXXXXLHG 972
            ILIMS+AGTGTAMF+MG+FMA Q+K+I CG+SLT  GMVLKF               LHG
Sbjct: 234  ILIMSKAGTGTAMFNMGIFMALQEKLIVCGTSLTVMGMVLKFIAGPAAMAIGSIVLGLHG 293

Query: 973  DVLRVAIIQAALPQSITSFIYAKEYGLHADVLSTAVIFGMIVSFPVLIGYYAILAFLH 1146
            DVLRVAIIQAALPQSITSFI+AKEYGLHADVLSTAVIFGM+VS PVL+ YYA L F+H
Sbjct: 294  DVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTAVIFGMLVSLPVLVAYYAALEFIH 351


>ref|XP_002329004.1| auxin efflux carrier component [Populus trichocarpa]
            gi|222839238|gb|EEE77589.1| auxin efflux carrier
            component [Populus trichocarpa]
          Length = 346

 Score =  412 bits (1059), Expect = e-113
 Identities = 212/356 (59%), Positives = 251/356 (70%)
 Frame = +1

Query: 76   MIGIEDIYKVIVATAPLYVALMLGYGSVKWWHIFTNEQCDAINLLVCYITLPLFTFEFTA 255
            MIG ED+YKV+VA  PLYVAL+LGYGSV+WW +FT EQC AIN  VCY TLPLFTFEFTA
Sbjct: 1    MIGWEDVYKVVVAMVPLYVALVLGYGSVRWWKVFTPEQCGAINRFVCYFTLPLFTFEFTA 60

Query: 256  NVDPFNWNFVLIGADAISKVIIVGVLILWAKFSSKGSYGWXXXXXXXXXXXXXXVVGVPM 435
            +VDPF  N+  IGADA+SKVIIV VL  WAK SSKGSY W              VVGVP+
Sbjct: 61   HVDPFKMNYRFIGADAVSKVIIVVVLAFWAKCSSKGSYSWSITSFSLCTLTNSLVVGVPI 120

Query: 436  IQAMYGSSAVDLVVQLSVIQAIIWXXXXXXXXXXXXXXIDCMESEMEDRDLEXXXXXXXX 615
            I+AMYG +AVDLVVQ SVIQAIIW              +    S   D+DLE        
Sbjct: 121  IKAMYGPAAVDLVVQSSVIQAIIWLTLLLLVLEFRRTGLG-FSSNNSDKDLEGSVDNTES 179

Query: 616  XXXXXXXEVVAGPSFCVVMMKVWLKLAMNPNAYACIVGITWALVANRWHLQMPSILEGSI 795
                      + P+F  +M  VW+KLAMNPN+YACI+G+ WA ++NRWH +MP+++EGSI
Sbjct: 180  ----------SRPAFWCLMRTVWVKLAMNPNSYACIIGLVWAFISNRWHFEMPAMMEGSI 229

Query: 796  LIMSRAGTGTAMFSMGLFMAKQKKIIACGSSLTAFGMVLKFXXXXXXXXXXXXXXXLHGD 975
            LIMS+AGTGTAMFSMG+FMA Q+K+I+CG+SL   GM+L+F               L GD
Sbjct: 230  LIMSKAGTGTAMFSMGIFMALQEKVISCGASLAVIGMILRFIAGPAAMAIGSIAVGLQGD 289

Query: 976  VLRVAIIQAALPQSITSFIYAKEYGLHADVLSTAVIFGMIVSFPVLIGYYAILAFL 1143
            VLRVAIIQAALPQSITSFI+AKEYGLHA+VLSTAVIFGM+ + PVLI YYAIL F+
Sbjct: 290  VLRVAIIQAALPQSITSFIFAKEYGLHAEVLSTAVIFGMLAALPVLITYYAILEFV 345


>ref|XP_002871722.1| hypothetical protein ARALYDRAFT_326097 [Arabidopsis lyrata subsp.
            lyrata] gi|297317559|gb|EFH47981.1| hypothetical protein
            ARALYDRAFT_326097 [Arabidopsis lyrata subsp. lyrata]
          Length = 352

 Score =  410 bits (1053), Expect = e-112
 Identities = 218/369 (59%), Positives = 249/369 (67%), Gaps = 12/369 (3%)
 Frame = +1

Query: 76   MIGIEDIYKVIVATAPLYVALMLGYGSVKWWHIFTNEQCDAINLLVCYITLPLFTFEFTA 255
            MI   D+YKVI A  PLYVAL+LGYGSVKWW+IFT +QCDAIN LVCY TLPLFT EFTA
Sbjct: 1    MISCGDVYKVIEAMVPLYVALILGYGSVKWWNIFTRDQCDAINRLVCYFTLPLFTIEFTA 60

Query: 256  NVDPFNWNFVLIGADAISKVIIVGVLILWAKFSSKGSYGWXXXXXXXXXXXXXXVVGVPM 435
            +VDPFN N+  I AD +SKVIIV VL  WAK+S+KGSY W              VVGVP+
Sbjct: 61   HVDPFNMNYRFIAADVLSKVIIVTVLAFWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query: 436  IQAMYGSSAVDLVVQLSVIQAIIWXXXXXXXXXXXXXX----------IDCMESEMEDRD 585
             +AMYG  AVDLVVQ SV QAI+W                        +D +  E   R+
Sbjct: 121  AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLELRKAGSSSNYSSDVKVDSINIENGKRE 180

Query: 586  LEXXXXXXXXXXXXXXXEVVAGP--SFCVVMMKVWLKLAMNPNAYACIVGITWALVANRW 759
            +                 VV G   SF  VM  VWLKLA NPN Y+CI+GI WAL++NRW
Sbjct: 181  I-----------------VVVGEEKSFLEVMSLVWLKLATNPNCYSCILGIAWALISNRW 223

Query: 760  HLQMPSILEGSILIMSRAGTGTAMFSMGLFMAKQKKIIACGSSLTAFGMVLKFXXXXXXX 939
            HL+MP ILEGSILIMS+AGTGTAMF+MG+FMA Q+K+I CG+SLT  GMVLKF       
Sbjct: 224  HLEMPGILEGSILIMSKAGTGTAMFNMGIFMALQEKLIVCGTSLTVMGMVLKFIAGPAAM 283

Query: 940  XXXXXXXXLHGDVLRVAIIQAALPQSITSFIYAKEYGLHADVLSTAVIFGMIVSFPVLIG 1119
                    LHGDVLRVAIIQAALPQSITSFI+AKEYGLHADVLSTAVIFGM+VS PVL+ 
Sbjct: 284  AIGSIALGLHGDVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTAVIFGMLVSLPVLVA 343

Query: 1120 YYAILAFLH 1146
            YYA L F+H
Sbjct: 344  YYAALEFIH 352


Top