BLASTX nr result

ID: Bupleurum21_contig00026259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026259
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91962.1| transposon protein, putative, Mariner sub-class [...    59   5e-07
gb|ABF93607.1| transposon protein, putative, Mariner sub-class [...    59   5e-07
gb|ACV32570.1| mar1 transposase [synthetic construct]                  58   9e-07
gb|AAX51973.1| transposase [Pisum sativum]                             57   2e-06
gb|AAX51974.1| transposase [Pisum sativum]                             57   2e-06

>gb|ABA91962.1| transposon protein, putative, Mariner sub-class [Oryza sativa
           Japonica Group]
          Length = 670

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = -1

Query: 234 NKVFLCLQLCMTEVIKSLGSNSYKLPHIGKAHLALNERLLLSINCDVDSIHQTTTFLQI 58
           N++FL L  CM EVI+ LG NSY LPHI K  L    RL L + CD  S++    +L++
Sbjct: 591 NRIFLSLHACMREVIEVLGDNSYDLPHIKKGVLERQGRLPLQLRCDAKSVNNANNYLRL 649


>gb|ABF93607.1| transposon protein, putative, Mariner sub-class [Oryza sativa
           Japonica Group]
          Length = 827

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = -1

Query: 234 NKVFLCLQLCMTEVIKSLGSNSYKLPHIGKAHLALNERLLLSINCDVDSIHQTTTFLQI 58
           N++FL L  CM EVI+ LG NSY LPHI K  L    RL L + CD  S++    +L++
Sbjct: 591 NRIFLSLHACMREVIEVLGDNSYDLPHIKKGVLERQGRLPLQLRCDAKSVNNANNYLRL 649


>gb|ACV32570.1| mar1 transposase [synthetic construct]
          Length = 576

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = -1

Query: 234 NKVFLCLQLCMTEVIKSLGSNSYKLPHIGKAHLALNERLLLSINCDVDSIHQTTTFLQ 61
           N++FL L  CM EVI+ LG NSY LPHI K  L    RL L + CD  S++    +L+
Sbjct: 519 NRIFLSLHACMREVIEVLGDNSYDLPHIKKGVLERQGRLPLQLRCDAKSVNNANNYLR 576


>gb|AAX51973.1| transposase [Pisum sativum]
          Length = 412

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = -1

Query: 267 KPFNMLSSDCLNKVFLCLQLCMTEVIKSLGSNSYKLPHIGKAHLALNERLLLSINCDVDS 88
           K F    S   N++F+ LQLCM E++K  GSN YK+PH+ K  L    +L + I CD   
Sbjct: 342 KSFENFPSIKSNRIFVSLQLCMIEIMKEKGSNKYKIPHVNKERLERVGQLPIQIKCDPIL 401

Query: 87  IHQTTTFLQIQ 55
           + +   +L ++
Sbjct: 402 VQEVKNYLNME 412


>gb|AAX51974.1| transposase [Pisum sativum]
          Length = 412

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = -1

Query: 267 KPFNMLSSDCLNKVFLCLQLCMTEVIKSLGSNSYKLPHIGKAHLALNERLLLSINCDVDS 88
           K F    S   N++F+ LQLCM E++K  GSN YK+PH+ K  L    +L + I CD   
Sbjct: 342 KSFENFPSIKSNRIFVSLQLCMIEIMKEKGSNKYKIPHVNKERLERVGQLPIQIKCDPIL 401

Query: 87  IHQTTTFLQIQ 55
           + +   +L ++
Sbjct: 402 VQEVKNYLNME 412


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