BLASTX nr result

ID: Bupleurum21_contig00026258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026258
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244...   273   5e-71
ref|XP_002318799.1| predicted protein [Populus trichocarpa] gi|2...   266   3e-69
ref|XP_002530555.1| conserved hypothetical protein [Ricinus comm...   262   8e-68
ref|NP_198513.1| NDR1/HIN1-like 25 [Arabidopsis thaliana] gi|332...   258   9e-67
ref|XP_002870497.1| hypothetical protein ARALYDRAFT_330253 [Arab...   258   2e-66

>ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244374 [Vitis vinifera]
           gi|296083806|emb|CBI24023.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  273 bits (697), Expect = 5e-71
 Identities = 137/248 (55%), Positives = 170/248 (68%), Gaps = 3/248 (1%)
 Frame = +2

Query: 56  MSDHQKIHPVHDPEAAPQHPSAPLVSRAASQSEHGDPVEHYPPLA---PTTHSKTPRKKR 226
           M+D Q+IHP  DPEA P  P+APLV R AS+S+  DP E YPP     P  HSK P+KKR
Sbjct: 1   MADPQRIHPAQDPEA-PHTPTAPLVPRGASKSDRSDPTEQYPPFQRTIPVMHSKPPKKKR 59

Query: 227 RSCFTRCLCWSLCXXXXXXXXXXXXXXXXXXXXQPKTPNYNVDSIRITQFNLNNDLSLSA 406
            SC  +C CW++                     +PK P Y++D +RITQ +L +D SLSA
Sbjct: 60  -SCLCKCFCWTISLLLLLIVIIAIVVAILFLVFKPKLPKYSIDGLRITQLSLGSDDSLSA 118

Query: 407 SFNVNITARNPNKKIGIYYEGGSRISVLYTGTKLCEGTWPKFYHGHRNTTVLNLRLTGQA 586
           +F+VNITARNPN KIGIYYEGGS I+V YTGT+LCEG+ PKFY GH+NTTVL + LTGQ 
Sbjct: 119 TFDVNITARNPNTKIGIYYEGGSSITVFYTGTQLCEGSLPKFYQGHQNTTVLTVELTGQT 178

Query: 587 VNASDLLRSIQEQQLAGRIPLNVRVRVPVRIKLGRLKLMKWKFLVKCSLVVDTLATDNVI 766
            NA+ LL ++QEQ+  G IPL ++V+ PVRIKLG+LKLMK KF   C+LVVD L  +N I
Sbjct: 179 QNATGLLTTLQEQRETGSIPLTLKVKQPVRIKLGKLKLMKMKFRATCNLVVDNLDANNTI 238

Query: 767 RIRERSCK 790
            I+  SCK
Sbjct: 239 SIKSSSCK 246


>ref|XP_002318799.1| predicted protein [Populus trichocarpa] gi|222859472|gb|EEE97019.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  266 bits (681), Expect = 3e-69
 Identities = 142/263 (53%), Positives = 177/263 (67%), Gaps = 18/263 (6%)
 Frame = +2

Query: 56  MSDHQKIHPV-----HDPEA----APQHPSAPLVSRAASQSEHGDPV-----EHYPPLA- 190
           M+DHQK++P+     HD +     APQ P  PLV R +S+S+ GDP       HYPP   
Sbjct: 1   MADHQKVYPLNTSSTHDDQPLDVEAPQTPRVPLVPRGSSKSDQGDPAAHIHGHHYPPFQR 60

Query: 191 --PTTHSKTPRKKRRSCFTRCLCWSLCXXXXXXXXXXXXXXXXXXXXQPKTPNYNVDSIR 364
             P TH+K P KKRRSC  R LCW+L                     QPK P +++D+++
Sbjct: 61  TIPVTHTKPP-KKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKFSIDTLQ 119

Query: 365 ITQFNLNNDLSLSASFNVNITARNPNKKIGIYYEGGSRISVLYTGTKLCEGTWPKFYHGH 544
           IT+FNL N+ SLSA+FNV ITARNPNKK+G+YYEGGS ISV YTGT LC+G+ PKFY GH
Sbjct: 120 ITRFNLTNNSSLSATFNVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLPKFYQGH 179

Query: 545 RNTTVLNLRLTGQAVNASDLLRSIQEQQL-AGRIPLNVRVRVPVRIKLGRLKLMKWKFLV 721
           RNTTVLN+ L+GQ  + + LL S+Q+QQL  G IPLN+RV  PVRIKLG+LKLMK KF V
Sbjct: 180 RNTTVLNVLLSGQTDDGNTLLTSLQQQQLQTGIIPLNLRVDQPVRIKLGKLKLMKVKFRV 239

Query: 722 KCSLVVDTLATDNVIRIRERSCK 790
           +C L +D+LA +N I IR  SCK
Sbjct: 240 RCRLDIDSLAANNAINIRNSSCK 262


>ref|XP_002530555.1| conserved hypothetical protein [Ricinus communis]
           gi|223529893|gb|EEF31823.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 253

 Score =  262 bits (669), Expect = 8e-68
 Identities = 137/250 (54%), Positives = 174/250 (69%), Gaps = 5/250 (2%)
 Frame = +2

Query: 56  MSDHQKIHPVHDPEAAPQHPSAPLVSRAASQSEHGDPV-EHYPPLA---PTTHSKTPRKK 223
           M+D Q+IHPV     APQ P+ PL+ R +S+S+ GDP  + YPP     P  HSK P+K 
Sbjct: 1   MADQQRIHPVTHDVEAPQTPTVPLMPRNSSKSDQGDPAAQQYPPFQRTFPVKHSKPPKK- 59

Query: 224 RRSCFTRCLCWSLCXXXXXXXXXXXXXXXXXXXXQPKTPNYNVDSIRITQFNLNNDLSLS 403
            RSC  +CLCW+L                     +PK P++++D ++ITQFNL++D SLS
Sbjct: 60  -RSCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDFSIDRLQITQFNLSSDSSLS 118

Query: 404 ASFNVNITARNPNKKIGIYYEGGSRISVLYTGTKLCEGTWPKFYHGHRNTTVLNLRLTGQ 583
           A+F+V ITA NPN+KIGIYYEGGS I V Y+GTKLCEG+ PKFY GH NTTVLN+ LTG 
Sbjct: 119 AAFDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLPKFYQGHENTTVLNVPLTGH 178

Query: 584 AVNASDLLRSIQEQQLA-GRIPLNVRVRVPVRIKLGRLKLMKWKFLVKCSLVVDTLATDN 760
             +A+ LL S+Q+QQ A G IPLN+RV+ PVRIKLG+LKL + KFLVKC L VD+L+T+N
Sbjct: 179 TQDAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLFEIKFLVKCKLDVDSLSTNN 238

Query: 761 VIRIRERSCK 790
            I IR  SCK
Sbjct: 239 DISIRNSSCK 248


>ref|NP_198513.1| NDR1/HIN1-like 25 [Arabidopsis thaliana]
           gi|332006750|gb|AED94133.1| NDR1/HIN1-like 25
           [Arabidopsis thaliana]
          Length = 248

 Score =  258 bits (660), Expect = 9e-67
 Identities = 133/250 (53%), Positives = 175/250 (70%), Gaps = 5/250 (2%)
 Frame = +2

Query: 56  MSDHQKIHPVHDPEAAPQHPSAPLVSRAASQSEHGDPV--EHYPPLAPTTHSKTPRKKR- 226
           MSDHQKIHPV DPEA P HP+APLV R +S+SEHGDP   +   PL P      PR+K+ 
Sbjct: 1   MSDHQKIHPVSDPEAPP-HPTAPLVPRGSSRSEHGDPTKTQQAAPLDP------PREKKG 53

Query: 227 -RSCFTRCLCWSLCXXXXXXXXXXXXXXXXXXXXQPKTPNYNVDSIRITQFNLNNDLSLS 403
            RSC+ RC+C++L                     +PK P+YN+D +++T+F LN DLSLS
Sbjct: 54  SRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLS 113

Query: 404 ASFNVNITARNPNKKIGIYYEGGSRISVLYTGTKLCEGTWPKFYHGHRNTTVLNLRLTGQ 583
            +FNV ITA+NPN+KIGIYYE GS+ISVLY  T++  G+ PKFY GH NTT++ + +TG 
Sbjct: 114 TAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGF 173

Query: 584 AVNASDLLRSIQEQQ-LAGRIPLNVRVRVPVRIKLGRLKLMKWKFLVKCSLVVDTLATDN 760
             NA+ L+ ++QEQQ L G IPL +RV  PVRIKLG+LKLMK +FLV+C + VD+LA ++
Sbjct: 174 TQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANS 233

Query: 761 VIRIRERSCK 790
           VIR+R  +CK
Sbjct: 234 VIRVRSSNCK 243


>ref|XP_002870497.1| hypothetical protein ARALYDRAFT_330253 [Arabidopsis lyrata subsp.
           lyrata] gi|297316333|gb|EFH46756.1| hypothetical protein
           ARALYDRAFT_330253 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  258 bits (658), Expect = 2e-66
 Identities = 131/248 (52%), Positives = 173/248 (69%), Gaps = 3/248 (1%)
 Frame = +2

Query: 56  MSDHQKIHPVHDPEAAPQHPSAPLVSRAASQSEHGDPV--EHYPPLAPTTHSKTPRKKRR 229
           MSDHQKIHPV DPEA P HP+APLV R +S+SEHGDP   +   PL P +     +K  R
Sbjct: 1   MSDHQKIHPVSDPEAPP-HPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPSK----KKGSR 55

Query: 230 SCFTRCLCWSLCXXXXXXXXXXXXXXXXXXXXQPKTPNYNVDSIRITQFNLNNDLSLSAS 409
           SC+ RC+C++L                     +PK P+YN+D +++T+F LN DLSLS  
Sbjct: 56  SCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKLPDYNIDRLQLTRFQLNQDLSLSTG 115

Query: 410 FNVNITARNPNKKIGIYYEGGSRISVLYTGTKLCEGTWPKFYHGHRNTTVLNLRLTGQAV 589
           FNV ITA+NPN+KIGIYYE GSRISVLY  T+L  G+ PKFY GH NTT++++ +TG   
Sbjct: 116 FNVTITAKNPNEKIGIYYEDGSRISVLYMQTRLSNGSLPKFYQGHENTTIISVEMTGFNQ 175

Query: 590 NASDLLRSIQEQQ-LAGRIPLNVRVRVPVRIKLGRLKLMKWKFLVKCSLVVDTLATDNVI 766
           NA+ ++ ++QEQQ L G IPL +RV  PVRIKLG+LKLM+ +FLV+C + VD+LA ++VI
Sbjct: 176 NATSVMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMEVRFLVRCGVSVDSLAANSVI 235

Query: 767 RIRERSCK 790
           R+R  +CK
Sbjct: 236 RVRSSNCK 243


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