BLASTX nr result

ID: Bupleurum21_contig00026248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026248
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...   253   3e-65
ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   248   1e-63
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   243   3e-62
ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   243   3e-62

>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 577

 Score =  253 bits (647), Expect = 3e-65
 Identities = 121/213 (56%), Positives = 168/213 (78%), Gaps = 2/213 (0%)
 Frame = -2

Query: 814  LYAALFLPLRQTVYIDNKSKEIPVVSYIFRNSLKLKSSDAETVVRLHGAAKKFMSLFPYI 635
            LYAALFLP R  +YI+ K K +PVV++IF++SLK K+SD+ETV+++H + +KF+++ P +
Sbjct: 366  LYAALFLPFRNIIYIE-KGKNVPVVNFIFKDSLKQKASDSETVMKIHKSLEKFLNIIPLL 424

Query: 634  ISNEE-KIGEVYWKREIIDVPAASKLRILTGLLLREIKDFWRVALLLSTLLYYDEVDITS 458
             S+++ +  EV W  E+IDVP ++KLR+LTG LLREIKDFWRVALL+ST++Y  ++D T 
Sbjct: 425  TSDDDTQPAEVDWALELIDVPFSAKLRVLTGFLLREIKDFWRVALLISTMIYPADIDSTQ 484

Query: 457  SSFEHDV-LDRRRQLFNQVEEAITTQGLDNVWAAKPLVNGNEIMSILHLQKGGPLVREWV 281
            S  +    LD+R++LF  VE+AIT QGL+ +W  KPLVNG EIMS+L L+ GGPLVREW 
Sbjct: 485  SFLDKQFELDKRKELFKTVEDAITKQGLEKIWDVKPLVNGKEIMSVLQLKSGGPLVREWQ 544

Query: 280  EKLLQWQLAYPSGSAEDCIEWMKEAQSKRARTE 182
            +KLL WQLA+P+G+AE+C++WMKE   KRAR E
Sbjct: 545  QKLLAWQLAHPTGTAEECLDWMKETHLKRARIE 577


>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
           vinifera]
          Length = 564

 Score =  248 bits (633), Expect = 1e-63
 Identities = 122/212 (57%), Positives = 167/212 (78%), Gaps = 5/212 (2%)
 Frame = -2

Query: 814 LYAALFLPLRQTVYIDNKSKEIPVVSYIFRNSLKLKSSDAETVVRLHGAAKKFMSLFPYI 635
           LYAALFLP R+T+Y   K+++IPVV++I RNSLKL++SDA+TVV +H A +KF+SL P+I
Sbjct: 355 LYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFI 414

Query: 634 ISNEE-KIGEVYWKREIIDVPAASKLRILTGLLLREIKDFWRVALLLSTLLYYDEV---- 470
            S E  +I E  W  EI+D+P  SKLRILTGLLLREIK FWRVAL++STLLY +++    
Sbjct: 415 ESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDINHTR 474

Query: 469 DITSSSFEHDVLDRRRQLFNQVEEAITTQGLDNVWAAKPLVNGNEIMSILHLQKGGPLVR 290
           DI+ ++F+   LD+RR++F  VE AI   GL+ VW  KPLVNG +IM++L L+ GGPLVR
Sbjct: 475 DISKNNFQ---LDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPLVR 531

Query: 289 EWVEKLLQWQLAYPSGSAEDCIEWMKEAQSKR 194
           +W +KL+QWQLA+PSG+AE+C++WM++ + KR
Sbjct: 532 DWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 563


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  248 bits (633), Expect = 1e-63
 Identities = 122/212 (57%), Positives = 167/212 (78%), Gaps = 5/212 (2%)
 Frame = -2

Query: 814 LYAALFLPLRQTVYIDNKSKEIPVVSYIFRNSLKLKSSDAETVVRLHGAAKKFMSLFPYI 635
           LYAALFLP R+T+Y   K+++IPVV++I RNSLKL++SDA+TVV +H A +KF+SL P+I
Sbjct: 310 LYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFI 369

Query: 634 ISNEE-KIGEVYWKREIIDVPAASKLRILTGLLLREIKDFWRVALLLSTLLYYDEV---- 470
            S E  +I E  W  EI+D+P  SKLRILTGLLLREIK FWRVAL++STLLY +++    
Sbjct: 370 ESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDINHTR 429

Query: 469 DITSSSFEHDVLDRRRQLFNQVEEAITTQGLDNVWAAKPLVNGNEIMSILHLQKGGPLVR 290
           DI+ ++F+   LD+RR++F  VE AI   GL+ VW  KPLVNG +IM++L L+ GGPLVR
Sbjct: 430 DISKNNFQ---LDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPLVR 486

Query: 289 EWVEKLLQWQLAYPSGSAEDCIEWMKEAQSKR 194
           +W +KL+QWQLA+PSG+AE+C++WM++ + KR
Sbjct: 487 DWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 518


>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
            [Cucumis sativus]
          Length = 577

 Score =  243 bits (621), Expect = 3e-62
 Identities = 120/213 (56%), Positives = 160/213 (75%), Gaps = 2/213 (0%)
 Frame = -2

Query: 814  LYAALFLPLRQTVYIDNKSKEIPVVSYIFRNSLKLKSSDAETVVRLHGAAKKFMSLFPYI 635
            LYA+LFLP R+  + D KSK+IP+V+YIFR+SLK K+SDAETVV +H A +KF+SL P +
Sbjct: 364  LYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQALEKFLSLIPLL 423

Query: 634  ISNEE-KIGEVYWKREIIDVPAASKLRILTGLLLREIKDFWRVALLLSTLLYYDEVDITS 458
            +S EE +   V W  E  DVPA S++R+LTGLLLREIKDFW VALL++TLLY  +VD   
Sbjct: 424  VSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLYPADVDYAQ 483

Query: 457  SSFE-HDVLDRRRQLFNQVEEAITTQGLDNVWAAKPLVNGNEIMSILHLQKGGPLVREWV 281
                 H  L++R++LF+ V   I   GL+NVW  KPLVNG EIM+IL L+ GGPLVREW 
Sbjct: 484  DLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQLKAGGPLVREWQ 543

Query: 280  EKLLQWQLAYPSGSAEDCIEWMKEAQSKRARTE 182
            +K+L WQLA+PSG++E+C++W++E  SKR + +
Sbjct: 544  QKILAWQLAHPSGTSEECLDWIRETHSKRVKLD 576


>ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
            [Cucumis sativus]
          Length = 577

 Score =  243 bits (621), Expect = 3e-62
 Identities = 120/213 (56%), Positives = 160/213 (75%), Gaps = 2/213 (0%)
 Frame = -2

Query: 814  LYAALFLPLRQTVYIDNKSKEIPVVSYIFRNSLKLKSSDAETVVRLHGAAKKFMSLFPYI 635
            LYA+LFLP R+  + D KSK+IP+V+YIFR+SLK K+SDAETVV +H A +KF+SL P +
Sbjct: 364  LYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQALEKFLSLIPLL 423

Query: 634  ISNEE-KIGEVYWKREIIDVPAASKLRILTGLLLREIKDFWRVALLLSTLLYYDEVDITS 458
            +S EE +   V W  E  DVPA S++R+LTGLLLREIKDFW VALL++TLLY  +VD   
Sbjct: 424  VSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLYPADVDYAQ 483

Query: 457  SSFE-HDVLDRRRQLFNQVEEAITTQGLDNVWAAKPLVNGNEIMSILHLQKGGPLVREWV 281
                 H  L++R++LF+ V   I   GL+NVW  KPLVNG EIM+IL L+ GGPLVREW 
Sbjct: 484  DLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQLKAGGPLVREWQ 543

Query: 280  EKLLQWQLAYPSGSAEDCIEWMKEAQSKRARTE 182
            +K+L WQLA+PSG++E+C++W++E  SKR + +
Sbjct: 544  QKILAWQLAHPSGTSEECLDWIRETHSKRVKLD 576


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