BLASTX nr result

ID: Bupleurum21_contig00026218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026218
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25461.3| unnamed protein product [Vitis vinifera]              263   2e-68
ref|XP_004165142.1| PREDICTED: anaphase-promoting complex subuni...   245   4e-63
ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...   242   4e-62
ref|XP_003616660.1| Anaphase-promoting complex subunit [Medicago...   242   4e-62
ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2...   227   1e-57

>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score =  263 bits (671), Expect = 2e-68
 Identities = 139/200 (69%), Positives = 150/200 (75%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599  LPLRHALDRCRESPPTDWPAAAYVLLGREDLALSCLAHSKKFKEPEPHTNMNLISVSTPY 420
            LPLRHALD+CRESPP+DWPAAAYVLLGREDLALSCLAHS K+KE E  TN+NLIS+STPY
Sbjct: 869  LPLRHALDKCRESPPSDWPAAAYVLLGREDLALSCLAHSHKYKELEIQTNVNLISMSTPY 928

Query: 419  MLHLHPVTIPSI-SDINESENTKLEDTDSVDGSINDGMEHIFNSSMQLRYGRDLRVNEVR 243
            ML LHPVTIPS  SD    +NTK EDTDSVDGS+ DGMEHIFNSS QLRYGRDLR+NEVR
Sbjct: 929  MLLLHPVTIPSTSSDTIGLDNTKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEVR 988

Query: 242  RLLCSARPVAIQTPVNPXXXXXXXXXXXXXXXXXXXXXLPIGRGAFXXXXXXXXXXXXXT 63
            RLLCSARPV+IQT VNP                     LP+GRGAF              
Sbjct: 989  RLLCSARPVSIQTSVNPSASDQDVQQAQLWQLAQRTTALPLGRGAFTLATTCTLLTEALA 1048

Query: 62   VPKLILAGRLPAQQNATVNL 3
            VPKL+LAGRLPAQQNATVNL
Sbjct: 1049 VPKLVLAGRLPAQQNATVNL 1068


>ref|XP_004165142.1| PREDICTED: anaphase-promoting complex subunit 1-like, partial
            [Cucumis sativus]
          Length = 1589

 Score =  245 bits (626), Expect = 4e-63
 Identities = 130/200 (65%), Positives = 142/200 (71%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599  LPLRHALDRCRESPPTDWPAAAYVLLGREDLALSCLAHSKKFKEPEPHTNMNLISVSTPY 420
            LPLRHALD+CRESPP DWPA+AY LLGREDLA+S LA S K KE E  TNMNLIS+STPY
Sbjct: 544  LPLRHALDKCRESPPNDWPASAYALLGREDLAMSSLASSCKHKEFETQTNMNLISMSTPY 603

Query: 419  MLHLHPVTIPS-ISDINESENTKLEDTDSVDGSINDGMEHIFNSSMQLRYGRDLRVNEVR 243
            MLHLHPVTIPS + D    +  K+ED DS++GS  DGMEHIFNSS QL+YGRDLR+NEVR
Sbjct: 604  MLHLHPVTIPSAVCDTTGLDAGKIEDADSIEGSTTDGMEHIFNSSTQLQYGRDLRLNEVR 663

Query: 242  RLLCSARPVAIQTPVNPXXXXXXXXXXXXXXXXXXXXXLPIGRGAFXXXXXXXXXXXXXT 63
            RLLCSARPVAIQT VNP                     LP GRGAF              
Sbjct: 664  RLLCSARPVAIQTSVNPSASDQDLQQAQLWQLAQRTTSLPFGRGAFTLATIYTLLTEAFV 723

Query: 62   VPKLILAGRLPAQQNATVNL 3
            VPKL+LAGRLPAQQNATVNL
Sbjct: 724  VPKLVLAGRLPAQQNATVNL 743


>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis vinifera]
          Length = 1716

 Score =  242 bits (617), Expect = 4e-62
 Identities = 132/200 (66%), Positives = 142/200 (71%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599  LPLRHALDRCRESPPTDWPAAAYVLLGREDLALSCLAHSKKFKEPEPHTNMNLISVSTPY 420
            LPLRHALD+CRESPP+DWPAAAYVLLGREDLALSCLAHS K+KE E  TN+NLIS+STPY
Sbjct: 766  LPLRHALDKCRESPPSDWPAAAYVLLGREDLALSCLAHSHKYKELEIQTNVNLISMSTPY 825

Query: 419  MLHLHPVTIPSI-SDINESENTKLEDTDSVDGSINDGMEHIFNSSMQLRYGRDLRVNEVR 243
            ML LHPVTIPS  SD    +NTK EDTDSVDGS+ DGMEHIFNSS QLRYGRDLR+NEVR
Sbjct: 826  MLLLHPVTIPSTSSDTIGLDNTKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEVR 885

Query: 242  RLLCSARPVAIQTPVNPXXXXXXXXXXXXXXXXXXXXXLPIGRGAFXXXXXXXXXXXXXT 63
            RLLCSARPV+IQT VNP                                           
Sbjct: 886  RLLCSARPVSIQTSVNP-------------------------------SASDQDVQQALA 914

Query: 62   VPKLILAGRLPAQQNATVNL 3
            VPKL+LAGRLPAQQNATVNL
Sbjct: 915  VPKLVLAGRLPAQQNATVNL 934


>ref|XP_003616660.1| Anaphase-promoting complex subunit [Medicago truncatula]
            gi|355517995|gb|AES99618.1| Anaphase-promoting complex
            subunit [Medicago truncatula]
          Length = 1854

 Score =  242 bits (617), Expect = 4e-62
 Identities = 131/200 (65%), Positives = 146/200 (73%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599  LPLRHALDRCRESPPTDWPAAAYVLLGREDLALSCLAHSKKFKEPEPHTNMNLISVSTPY 420
            LPLRHALD+CR+S P DWPAAAYVLLGR+DLA+S LA   K+KE E  TN+N+IS+STPY
Sbjct: 750  LPLRHALDKCRDSSPNDWPAAAYVLLGRQDLAMSTLARECKYKEIETPTNVNVISMSTPY 809

Query: 419  MLHLHPVTIPS-ISDINESENTKLEDTDSVDGSINDGMEHIFNSSMQLRYGRDLRVNEVR 243
            ML+LHPVTI S ISD    E TKLEDTDSVDGS+ DGMEHIFNSS QLRYGRDLR+NEVR
Sbjct: 810  MLNLHPVTISSTISDAIGLEGTKLEDTDSVDGSMLDGMEHIFNSSTQLRYGRDLRLNEVR 869

Query: 242  RLLCSARPVAIQTPVNPXXXXXXXXXXXXXXXXXXXXXLPIGRGAFXXXXXXXXXXXXXT 63
            RLLCS+RPVAIQT VN                      LP+GRGAF             +
Sbjct: 870  RLLCSSRPVAIQTSVNHSASDQDLQQTQLWNLAQRTTSLPLGRGAFTLATIHTLLTETFS 929

Query: 62   VPKLILAGRLPAQQNATVNL 3
            VPKL+LAGRLPAQQNATVNL
Sbjct: 930  VPKLVLAGRLPAQQNATVNL 949


>ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1|
            predicted protein [Populus trichocarpa]
          Length = 1929

 Score =  227 bits (579), Expect = 1e-57
 Identities = 130/215 (60%), Positives = 141/215 (65%), Gaps = 16/215 (7%)
 Frame = -3

Query: 599  LPLRHALDRCRESPPTDWPAAAYVLLGREDLALSCLAHSKKFKEPEPHTNMNLISVSTPY 420
            LPLRHALD+CRESPPTDW AAAYVLLGREDLALS  A   K  E E   N+NLIS+STPY
Sbjct: 769  LPLRHALDKCRESPPTDWSAAAYVLLGREDLALSRSALPCKSGELETQPNVNLISMSTPY 828

Query: 419  MLHLHPVTIPS-ISDINESENTKLEDTDSVDGSINDGMEHIFNSSMQLRYGRDLRVNEVR 243
            MLHLHPVTIPS +SD    E+ K ED+DS DGS+ DGMEHIFNSS QL+YGRD R+NEVR
Sbjct: 829  MLHLHPVTIPSTVSDTTGLESAKFEDSDSADGSMMDGMEHIFNSSTQLQYGRDQRLNEVR 888

Query: 242  RLLCSARPVAIQTPVNP---------------XXXXXXXXXXXXXXXXXXXXXLPIGRGA 108
            RLLCS RPVAIQT VNP                                    LP+GRGA
Sbjct: 889  RLLCSTRPVAIQTSVNPSASDQDIQQILILLCLLLSLLLVKAQLWHLAQRTTALPLGRGA 948

Query: 107  FXXXXXXXXXXXXXTVPKLILAGRLPAQQNATVNL 3
            F             TVPKL+LAGRLPAQQNATVNL
Sbjct: 949  FTLATISTLLTEAFTVPKLVLAGRLPAQQNATVNL 983


Top