BLASTX nr result

ID: Bupleurum21_contig00026209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026209
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]       291   4e-77
gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [...   291   5e-77
emb|CAC84495.1| putative chlorophyll A-B binding protein type I ...   290   6e-77
gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [...   290   6e-77
gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]    290   1e-76

>dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
          Length = 265

 Score =  291 bits (745), Expect = 4e-77
 Identities = 137/149 (91%), Positives = 145/149 (97%)
 Frame = -3

Query: 448 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVVLMGFVEGYR 269
           E+LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMGFVEGYR
Sbjct: 116 EILARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYR 175

Query: 268 IGGGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTG 89
           +GGGPLGEGLD +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235

Query: 88  KGPVENLYDHLADPTVNNAWAFATNFVPG 2
           KGP+ENLYDHLADP  NNAWA+ATNFVPG
Sbjct: 236 KGPIENLYDHLADPVANNAWAYATNFVPG 264


>gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
           longiflorum]
          Length = 264

 Score =  291 bits (744), Expect = 5e-77
 Identities = 137/149 (91%), Positives = 146/149 (97%)
 Frame = -3

Query: 448 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVVLMGFVEGYR 269
           ELL++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWAVQVVLMGF+EGYR
Sbjct: 115 ELLSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYR 174

Query: 268 IGGGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTG 89
           IGGGPLGEGLD LYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 175 IGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 234

Query: 88  KGPVENLYDHLADPTVNNAWAFATNFVPG 2
           KGPVENLYDHLADP  NNAWA+ATNFVPG
Sbjct: 235 KGPVENLYDHLADPATNNAWAYATNFVPG 263


>emb|CAC84495.1| putative chlorophyll A-B binding protein type I [Pinus pinaster]
          Length = 195

 Score =  290 bits (743), Expect = 6e-77
 Identities = 135/149 (90%), Positives = 145/149 (97%)
 Frame = -3

Query: 448 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVVLMGFVEGYR 269
           ELLA+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR
Sbjct: 46  ELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYR 105

Query: 268 IGGGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTG 89
           +GGGPLGEGLD LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 106 VGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 165

Query: 88  KGPVENLYDHLADPTVNNAWAFATNFVPG 2
           KGP+ENLYDHLADPT NNAWA+ATNFVPG
Sbjct: 166 KGPIENLYDHLADPTANNAWAYATNFVPG 194


>gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
          Length = 264

 Score =  290 bits (743), Expect = 6e-77
 Identities = 134/149 (89%), Positives = 146/149 (97%)
 Frame = -3

Query: 448 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVVLMGFVEGYR 269
           E+LA+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMGFVEGYR
Sbjct: 115 EILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 174

Query: 268 IGGGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTG 89
           +GGGPLGEGLDA+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 175 VGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234

Query: 88  KGPVENLYDHLADPTVNNAWAFATNFVPG 2
           KGP+ENLYDHLADP  NNAWA+ATNFVPG
Sbjct: 235 KGPIENLYDHLADPVANNAWAYATNFVPG 263


>gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]
          Length = 265

 Score =  290 bits (741), Expect = 1e-76
 Identities = 137/149 (91%), Positives = 145/149 (97%)
 Frame = -3

Query: 448 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVVLMGFVEGYR 269
           E+LA+NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYR
Sbjct: 116 EILAKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYR 175

Query: 268 IGGGPLGEGLDALYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTG 89
           IGGGPLGEGLD+LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 IGGGPLGEGLDSLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235

Query: 88  KGPVENLYDHLADPTVNNAWAFATNFVPG 2
           KGPVENLYDHLADP  NNAWA+ATNFVPG
Sbjct: 236 KGPVENLYDHLADPVANNAWAYATNFVPG 264


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