BLASTX nr result

ID: Bupleurum21_contig00026204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026204
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp....    59   5e-07
ref|XP_002311608.1| chromatin remodeling complex subunit [Populu...    58   7e-07
ref|XP_002281240.2| PREDICTED: transcription regulatory protein ...    57   2e-06
emb|CBI26213.3| unnamed protein product [Vitis vinifera]               57   2e-06
emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]    57   2e-06

>ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330391|gb|EFH60810.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1130

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +1

Query: 151 MGAQASEERESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297
           M AQ  +ER  + Q D ++ TK+LICAVN +SR+LPLPP LF +VSSIY
Sbjct: 1   MVAQQLQERCGNSQEDPVETTKSLICAVNYISRDLPLPPHLFAAVSSIY 49


>ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222851428|gb|EEE88975.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1131

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 181 SSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297
           SS   DH+QKTK+LI A+N +SR+LPLPP LFD+VSSIY
Sbjct: 19  SSTLEDHVQKTKSLISALNFVSRDLPLPPDLFDTVSSIY 57


>ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
           vinifera]
          Length = 1114

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 178 ESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297
           ES    D +QK KTLICA+NL+SRNLPLPP +F++VSSIY
Sbjct: 6   ESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45


>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 178 ESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297
           ES    D +QK KTLICA+NL+SRNLPLPP +F++VSSIY
Sbjct: 6   ESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45


>emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]
          Length = 568

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 178 ESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297
           ES    D +QK KTLICA+NL+SRNLPLPP +F++VSSIY
Sbjct: 6   ESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45


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