BLASTX nr result
ID: Bupleurum21_contig00026204
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00026204 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp.... 59 5e-07 ref|XP_002311608.1| chromatin remodeling complex subunit [Populu... 58 7e-07 ref|XP_002281240.2| PREDICTED: transcription regulatory protein ... 57 2e-06 emb|CBI26213.3| unnamed protein product [Vitis vinifera] 57 2e-06 emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera] 57 2e-06 >ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330391|gb|EFH60810.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1130 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/49 (59%), Positives = 37/49 (75%) Frame = +1 Query: 151 MGAQASEERESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297 M AQ +ER + Q D ++ TK+LICAVN +SR+LPLPP LF +VSSIY Sbjct: 1 MVAQQLQERCGNSQEDPVETTKSLICAVNYISRDLPLPPHLFAAVSSIY 49 >ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851428|gb|EEE88975.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1131 Score = 58.2 bits (139), Expect = 7e-07 Identities = 27/39 (69%), Positives = 33/39 (84%) Frame = +1 Query: 181 SSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297 SS DH+QKTK+LI A+N +SR+LPLPP LFD+VSSIY Sbjct: 19 SSTLEDHVQKTKSLISALNFVSRDLPLPPDLFDTVSSIY 57 >ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis vinifera] Length = 1114 Score = 57.0 bits (136), Expect = 2e-06 Identities = 27/40 (67%), Positives = 33/40 (82%) Frame = +1 Query: 178 ESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297 ES D +QK KTLICA+NL+SRNLPLPP +F++VSSIY Sbjct: 6 ESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45 >emb|CBI26213.3| unnamed protein product [Vitis vinifera] Length = 1110 Score = 57.0 bits (136), Expect = 2e-06 Identities = 27/40 (67%), Positives = 33/40 (82%) Frame = +1 Query: 178 ESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297 ES D +QK KTLICA+NL+SRNLPLPP +F++VSSIY Sbjct: 6 ESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45 >emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera] Length = 568 Score = 57.0 bits (136), Expect = 2e-06 Identities = 27/40 (67%), Positives = 33/40 (82%) Frame = +1 Query: 178 ESSLQNDHLQKTKTLICAVNLLSRNLPLPPQLFDSVSSIY 297 ES D +QK KTLICA+NL+SRNLPLPP +F++VSSIY Sbjct: 6 ESHPTLDPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45