BLASTX nr result

ID: Bupleurum21_contig00026191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026191
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19705.3| unnamed protein product [Vitis vinifera]               64   5e-08
ref|XP_002282344.1| PREDICTED: DNA-3-methyladenine glycosylase 1...    64   5e-08
ref|ZP_08915077.1| HhH-GPD base excision DNA repair familyprotei...    62   3e-07
ref|XP_003528090.1| PREDICTED: DNA-3-methyladenine glycosylase 1...    61   4e-07
gb|ACU22727.1| unknown [Glycine max]                                   61   4e-07

>emb|CBI19705.3| unnamed protein product [Vitis vinifera]
          Length = 351

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 7/205 (3%)
 Frame = +3

Query: 207 IELGLHHLGNVDANXXXXXXXXXXXXPVVVDNM-TIFQRIAKAVI*LVSAPATKATIYQA 383
           IE+ L HL N D +            P   D+  T F  + K+++    A     +IY  
Sbjct: 118 IEIALRHLRNADPHLAPLIDLHP---PPTFDSFHTPFLALTKSILYQQLAYKAGTSIYTR 174

Query: 384 LEGLCGGPVSLY--SLCQASHHQLTNIGVRSRREANVVLVMSRYYQE----EHGFSILDC 545
             GLCGG   +   ++   + HQL  IGV S R+A+ +  ++R YQ     + G   +D 
Sbjct: 175 FVGLCGGEAGVLPETVLALTPHQLRQIGV-SGRKASYLHDLARKYQNGILSDTGIITMD- 232

Query: 546 YQNKTDQALFDEICKLVGINPYIALTVIVFAFGKTDFLPIYDRDFRVALNRYFNQQLDLP 725
                D++LF  +  + GI  +     ++F+  + D LP+ D   R  +   +  + +LP
Sbjct: 233 -----DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPVNDLGVRKGVQLLYGLE-ELP 286

Query: 726 LWTDEARAAVEAWAPFKGLAAWLIW 800
               +     E W P++ +A+W IW
Sbjct: 287 R-PSQMEQLCEKWRPYRSVASWYIW 310


>ref|XP_002282344.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Vitis vinifera]
          Length = 363

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 7/205 (3%)
 Frame = +3

Query: 207 IELGLHHLGNVDANXXXXXXXXXXXXPVVVDNM-TIFQRIAKAVI*LVSAPATKATIYQA 383
           IE+ L HL N D +            P   D+  T F  + K+++    A     +IY  
Sbjct: 111 IEIALRHLRNADPHLAPLIDLHP---PPTFDSFHTPFLALTKSILYQQLAYKAGTSIYTR 167

Query: 384 LEGLCGGPVSLY--SLCQASHHQLTNIGVRSRREANVVLVMSRYYQE----EHGFSILDC 545
             GLCGG   +   ++   + HQL  IGV S R+A+ +  ++R YQ     + G   +D 
Sbjct: 168 FVGLCGGEAGVLPETVLALTPHQLRQIGV-SGRKASYLHDLARKYQNGILSDTGIITMD- 225

Query: 546 YQNKTDQALFDEICKLVGINPYIALTVIVFAFGKTDFLPIYDRDFRVALNRYFNQQLDLP 725
                D++LF  +  + GI  +     ++F+  + D LP+ D   R  +   +  + +LP
Sbjct: 226 -----DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPVNDLGVRKGVQLLYGLE-ELP 279

Query: 726 LWTDEARAAVEAWAPFKGLAAWLIW 800
               +     E W P++ +A+W IW
Sbjct: 280 R-PSQMEQLCEKWRPYRSVASWYIW 303


>ref|ZP_08915077.1| HhH-GPD base excision DNA repair familyprotein, Probable
           3-methyladenine DNAglycosylase/8-oxoguanine DNA
           glycosylase [Candidatus Burkholderia kirkii UZHbot1]
           gi|350526662|emb|CCD39994.1| HhH-GPD base excision DNA
           repair familyprotein, Probable 3-methyladenine
           DNAglycosylase/8-oxoguanine DNA glycosylase [Candidatus
           Burkholderia kirkii UZHbot1]
          Length = 350

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 40/164 (24%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
 Frame = +3

Query: 312 FQRIAKAVI*LVSAPATKATIYQALEGLCGGPVSLYSLCQASHHQLTNIGVRSRREANVV 491
           F  +A++V     +      I++ ++G C   +      +  H +L   G+ SRR+A  +
Sbjct: 184 FSTLARSVAGQQISTKAAQAIWERVKGACP-EIHPAQFIRLGHEKLQACGL-SRRKAEYI 241

Query: 492 LVMSRYYQEEHGFSILDCYQNKTDQALFDEICKLVGINPYIALTVIVFAFGKTDFLPIYD 671
           L +++++  E+G   +D + ++ D+A+  E+ ++ GI  + A   ++F   + D LP+ D
Sbjct: 242 LDLAQHF--ENGALHVDAWTSRDDEAVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDD 299

Query: 672 RDFRVALN-RYFNQQLDLPLWTDEARAAVEAWAPFKGLAAWLIW 800
                A++  YF+ +   P+   EAR     W P++ +A W +W
Sbjct: 300 LGLIQAISVNYFSGE---PVTRSEAREVAANWEPWRTVATWYMW 340


>ref|XP_003528090.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Glycine max]
          Length = 351

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
 Frame = +3

Query: 177 VLALGIEID-HIELGLHHLGNVDANXXXXXXXXXXXXPVVVDNM-TIFQRIAKAVI*LVS 350
           ++A  +  D  +E+ L +L N D              P   DN  T F  + ++++    
Sbjct: 85  IVARSLSCDGEVEISLRYLRNADP---LLSPLIDIHQPPTFDNFHTPFLALTRSILYQQL 141

Query: 351 APATKATIYQALEGLCGGPVSLY--SLCQASHHQLTNIGVRSRREANVVLVMSRYYQEEH 524
           A     +IY    GLCGG   +   ++   +  QL  IGV S R+A+ +  ++R YQ  +
Sbjct: 142 AFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGV-SGRKASYLHDLARKYQ--N 198

Query: 525 GFSILDCYQNKTDQALFDEICKLVGINPYIALTVIVFAFGKTDFLPIYDRDFRVALNRYF 704
           G        N  D++LF  +  + GI  +     ++F+  + D LPI D   R  +   +
Sbjct: 199 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 258

Query: 705 NQQLDLPLWTDEARAAVEAWAPFKGLAAWLIW 800
           N + DLP    +     + W P++ +A+W +W
Sbjct: 259 NLE-DLPR-PSQMDQLCDKWRPYRSVASWYMW 288


>gb|ACU22727.1| unknown [Glycine max]
          Length = 351

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
 Frame = +3

Query: 177 VLALGIEID-HIELGLHHLGNVDANXXXXXXXXXXXXPVVVDNM-TIFQRIAKAVI*LVS 350
           ++A  +  D  +E+ L +L N D              P   DN  T F  + ++++    
Sbjct: 85  IVARSLSCDGEVEISLRYLRNADP---LLSPLIDIHQPPTFDNFHTPFLALTRSILYQQL 141

Query: 351 APATKATIYQALEGLCGGPVSLY--SLCQASHHQLTNIGVRSRREANVVLVMSRYYQEEH 524
           A     +IY    GLCGG   +   ++   +  QL  IGV S R+A+ +  ++R YQ  +
Sbjct: 142 AFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGV-SGRKASYLHDLARKYQ--N 198

Query: 525 GFSILDCYQNKTDQALFDEICKLVGINPYIALTVIVFAFGKTDFLPIYDRDFRVALNRYF 704
           G        N  D++LF  +  + GI  +     ++F+  + D LPI D   R  +   +
Sbjct: 199 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 258

Query: 705 NQQLDLPLWTDEARAAVEAWAPFKGLAAWLIW 800
           N + DLP    +     + W P++ +A+W +W
Sbjct: 259 NLE-DLPR-PSQMDQLCDKWRPYRSVASWYMW 288


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