BLASTX nr result

ID: Bupleurum21_contig00026153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026153
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633287.1| PREDICTED: lipid-A-disaccharide synthase-lik...   195   4e-48
ref|XP_002320495.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46
ref|XP_002528957.1| Lipid-A-disaccharide synthase, putative [Ric...   185   3e-45
gb|AAY34177.1| At2g04560 [Arabidopsis thaliana]                       184   5e-45
ref|NP_178535.3| transferase [Arabidopsis thaliana] gi|330250753...   184   5e-45

>ref|XP_003633287.1| PREDICTED: lipid-A-disaccharide synthase-like [Vitis vinifera]
          Length = 460

 Score =  195 bits (495), Expect = 4e-48
 Identities = 97/130 (74%), Positives = 113/130 (86%)
 Frame = +3

Query: 90  FGQAKRHFSISAQSAIDMASKDGELRVFIVAGEVSGDTIGSRLMASLKKLSPLPTCFSGV 269
           F    R FS+S ++ IDMA+KD ELRVFIV+GEVSGDTIGSRLMASLK +SP P  F+GV
Sbjct: 12  FSWLVRSFSVSRRAPIDMAAKDSELRVFIVSGEVSGDTIGSRLMASLKGISPFPIRFAGV 71

Query: 270 GGLMMSKQGLKSLFPIEDIAVMGIWELLPHLHKFRVRLNQTVKAAELFRPHVVVTVDSKG 449
           GG MMSKQGLK LFP+EDIAVMGIWELLPHL+KFR+RL +T++AA LF+PHVV+T+DSKG
Sbjct: 72  GGPMMSKQGLKPLFPMEDIAVMGIWELLPHLNKFRMRLKETIEAAFLFQPHVVLTIDSKG 131

Query: 450 FSFRLLKQLR 479
           FSFR LKQLR
Sbjct: 132 FSFRFLKQLR 141


>ref|XP_002320495.1| predicted protein [Populus trichocarpa] gi|222861268|gb|EEE98810.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/119 (78%), Positives = 108/119 (90%)
 Frame = +3

Query: 123 AQSAIDMASKDGELRVFIVAGEVSGDTIGSRLMASLKKLSPLPTCFSGVGGLMMSKQGLK 302
           +++ +DM  KDGELRVFIVAGEVSGD+I SRLMASLKKLSPLP  FSGVGG  MSK+GL+
Sbjct: 1   SRTVVDMGDKDGELRVFIVAGEVSGDSIASRLMASLKKLSPLPIRFSGVGGPRMSKEGLE 60

Query: 303 SLFPIEDIAVMGIWELLPHLHKFRVRLNQTVKAAELFRPHVVVTVDSKGFSFRLLKQLR 479
           SLFP+EDI+VMG+WELLPHL+KFRVRL +T++ A LF+PHVVVTVDSKGFSFRLLKQLR
Sbjct: 61  SLFPMEDISVMGMWELLPHLNKFRVRLKETIEGAILFQPHVVVTVDSKGFSFRLLKQLR 119


>ref|XP_002528957.1| Lipid-A-disaccharide synthase, putative [Ricinus communis]
           gi|223531603|gb|EEF33431.1| Lipid-A-disaccharide
           synthase, putative [Ricinus communis]
          Length = 469

 Score =  185 bits (470), Expect = 3e-45
 Identities = 98/148 (66%), Positives = 120/148 (81%), Gaps = 4/148 (2%)
 Frame = +3

Query: 48  RTLRIYERVTH--VGIFGQA--KRHFSISAQSAIDMASKDGELRVFIVAGEVSGDTIGSR 215
           R LRI+  +++    +F +   +R+ S++ +S ++ A ++GELRVFI AGEVSGD+IGSR
Sbjct: 4   RALRIWNNLSNNTTALFLKLHRRRYVSVTGRSIMEGACRNGELRVFIFAGEVSGDSIGSR 63

Query: 216 LMASLKKLSPLPTCFSGVGGLMMSKQGLKSLFPIEDIAVMGIWELLPHLHKFRVRLNQTV 395
           LMASLK LSP P  F+GVGG MMSK+GLKSLFP+EDIAVMGIWELLPHL+KFR RL +T 
Sbjct: 64  LMASLKNLSPTPIRFAGVGGFMMSKEGLKSLFPMEDIAVMGIWELLPHLNKFRERLKETT 123

Query: 396 KAAELFRPHVVVTVDSKGFSFRLLKQLR 479
           +AA  F PHVVVTVDSKGFSFRLLKQLR
Sbjct: 124 EAAFSFLPHVVVTVDSKGFSFRLLKQLR 151


>gb|AAY34177.1| At2g04560 [Arabidopsis thaliana]
          Length = 156

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/127 (73%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
 Frame = +3

Query: 102 KRHFSI-SAQSAIDMASKDGELRVFIVAGEVSGDTIGSRLMASLKKLSPLPTCFSGVGGL 278
           KR+ S  +A+S ID A+ DGELRVFIV+GEVSGD IGSRLM+SLKKLSPLP  F+GVGG 
Sbjct: 19  KRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFNGVGGS 78

Query: 279 MMSKQGLKSLFPIEDIAVMGIWELLPHLHKFRVRLNQTVKAAELFRPHVVVTVDSKGFSF 458
           +M K+GL SLFP+ED+AVMG+WELLPHL+KFRV+L +T+ AA  F+PHVVVTVDSKGFSF
Sbjct: 79  LMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRVKLKETIDAAVKFKPHVVVTVDSKGFSF 138

Query: 459 RLLKQLR 479
           RLLK+LR
Sbjct: 139 RLLKELR 145


>ref|NP_178535.3| transferase [Arabidopsis thaliana] gi|330250753|gb|AEC05847.1|
           transferase [Arabidopsis thaliana]
          Length = 460

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/127 (73%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
 Frame = +3

Query: 102 KRHFSI-SAQSAIDMASKDGELRVFIVAGEVSGDTIGSRLMASLKKLSPLPTCFSGVGGL 278
           KR+ S  +A+S ID A+ DGELRVFIV+GEVSGD IGSRLM+SLKKLSPLP  F+GVGG 
Sbjct: 19  KRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFNGVGGS 78

Query: 279 MMSKQGLKSLFPIEDIAVMGIWELLPHLHKFRVRLNQTVKAAELFRPHVVVTVDSKGFSF 458
           +M K+GL SLFP+ED+AVMG+WELLPHL+KFRV+L +T+ AA  F+PHVVVTVDSKGFSF
Sbjct: 79  LMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRVKLKETIDAAVKFKPHVVVTVDSKGFSF 138

Query: 459 RLLKQLR 479
           RLLK+LR
Sbjct: 139 RLLKELR 145


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