BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026138
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   288   5e-76
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   281   6e-74
ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|2...   270   1e-70
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              265   4e-69
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   263   1e-68

>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  288 bits (737), Expect = 5e-76
 Identities = 141/195 (72%), Positives = 163/195 (83%), Gaps = 2/195 (1%)
 Frame = +1

Query: 22  STRFGSFTA--LVALKVMYFGQRFYGFGSEAHTDPTIESEIFKALAETRLVYGEKKGWQY 195
           +TRF S  +   VALKVMYFG+RFYGF SEA  +PT+ESE+FKA  +TRL+ G KK  QY
Sbjct: 72  NTRFMSHHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQY 131

Query: 196 SRCGRTDKGVSSVGQVIALYLRSCHKVKDGNNGYSGELITDDLCEGELDYVQILNKVLPK 375
           SRCGRTDKGVSSVGQVIAL+LRS  K+ + NNG SG ++ D+  EGE+DYV++LN+VLP 
Sbjct: 132 SRCGRTDKGVSSVGQVIALFLRSNLKISETNNGNSG-VVLDEQHEGEIDYVRVLNRVLPN 190

Query: 376 DIRVMGWCPVPIDFSARFSCLSREYKYFFWKANLNIVAMEAASTKLVGEHDFRNFCKMDA 555
           DIR+MGWCP P+DF ARFSCLSREYKYFFWK NLNI AME+A  KLVGEHDFRNFCKMDA
Sbjct: 191 DIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKLVGEHDFRNFCKMDA 250

Query: 556 ANVHNFRRRITLFEI 600
           ANVHN+RRRI LFEI
Sbjct: 251 ANVHNYRRRIKLFEI 265


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  281 bits (719), Expect = 6e-74
 Identities = 139/195 (71%), Positives = 160/195 (82%), Gaps = 2/195 (1%)
 Frame = +1

Query: 22  STRFGSFTA--LVALKVMYFGQRFYGFGSEAHTDPTIESEIFKALAETRLVYGEKKGWQY 195
           +TRF S  +   VALKV YFG+RFYGF SEA  +PT+ESE+FKA  +TRL+ G+KK  QY
Sbjct: 72  NTRFMSHHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQY 131

Query: 196 SRCGRTDKGVSSVGQVIALYLRSCHKVKDGNNGYSGELITDDLCEGELDYVQILNKVLPK 375
           SRCGRTDKGVSSVGQVIAL+LRS  K+   NNG SG ++ D+  EGE+DYV +LN+VLP 
Sbjct: 132 SRCGRTDKGVSSVGQVIALFLRSNLKISATNNGNSG-VVLDEQHEGEIDYVGVLNRVLPN 190

Query: 376 DIRVMGWCPVPIDFSARFSCLSREYKYFFWKANLNIVAMEAASTKLVGEHDFRNFCKMDA 555
           DIR+MGWCP P+DF ARFSCLSREYKYFFWK NLNI A+E A  KLVGEHDFRNFCKMDA
Sbjct: 191 DIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDA 250

Query: 556 ANVHNFRRRITLFEI 600
           ANVHN+RR ITLFEI
Sbjct: 251 ANVHNYRRCITLFEI 265


>ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|222843877|gb|EEE81424.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  270 bits (690), Expect = 1e-70
 Identities = 131/185 (70%), Positives = 150/185 (81%), Gaps = 2/185 (1%)
 Frame = +1

Query: 52  VALKVMYFGQRFYGFGSEAHTDPTIESEIFKALAETRLVYGEKKGWQYSRCGRTDKGVSS 231
           VALKVMYFGQRFYGF  EA  DPT+ESEIFKAL  TRL+ G++K  QYSRCGRTDKGVS+
Sbjct: 95  VALKVMYFGQRFYGFSLEAQMDPTVESEIFKALETTRLLIGDRKEIQYSRCGRTDKGVSA 154

Query: 232 VGQVIALYLRSCHKVKDGNNGYSGELITD--DLCEGELDYVQILNKVLPKDIRVMGWCPV 405
           VGQVIALYLRS  K  D +N +SGE + +  D   GE+DYV++LN VLPKDIR++GWCPV
Sbjct: 155 VGQVIALYLRSKLKDIDAHNKHSGETVPEEQDGQPGEIDYVRVLNGVLPKDIRIVGWCPV 214

Query: 406 PIDFSARFSCLSREYKYFFWKANLNIVAMEAASTKLVGEHDFRNFCKMDAANVHNFRRRI 585
           P DFSARFSCLSREYKYFFW  NLN++ ME A  KL+GEHDFRNFCKMDA  VHN+RR +
Sbjct: 215 PSDFSARFSCLSREYKYFFWNDNLNLLVMETAGKKLIGEHDFRNFCKMDAVKVHNYRRNV 274

Query: 586 TLFEI 600
             FEI
Sbjct: 275 MSFEI 279


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  265 bits (678), Expect = 4e-69
 Identities = 133/200 (66%), Positives = 150/200 (75%), Gaps = 17/200 (8%)
 Frame = +1

Query: 52  VALKVMYFGQRFYGFGSEAHTDPTIESEIFKALAETRLVYGEKKGWQYSRCGRTDKGVSS 231
           VALKVMYFG RFYGF SEAH DPT+ESEIFKAL +T L  G+KK  QYSRCGRTDKGVSS
Sbjct: 103 VALKVMYFGPRFYGFASEAHMDPTVESEIFKALEKTWLAVGDKKELQYSRCGRTDKGVSS 162

Query: 232 VGQVIALYLRSCHKVKDGNNGYSGELITDD-----------------LCEGELDYVQILN 360
           VGQVIAL+LRS  K        S E++ ++                   EGE+DY+++LN
Sbjct: 163 VGQVIALFLRSNLKEIGAREENSKEVVPEEQYEERREVKDEGGGDSLASEGEIDYMRVLN 222

Query: 361 KVLPKDIRVMGWCPVPIDFSARFSCLSREYKYFFWKANLNIVAMEAASTKLVGEHDFRNF 540
           +VLPKDIRVMGWCPVPI F ARFSCLSREYKYFFW+ NLNI+AME+A  K VGEHDFRNF
Sbjct: 223 RVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMESAGKKFVGEHDFRNF 282

Query: 541 CKMDAANVHNFRRRITLFEI 600
           CKMDA NVHN+RR I  FEI
Sbjct: 283 CKMDAVNVHNYRRHIISFEI 302


>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 438

 Score =  263 bits (673), Expect = 1e-68
 Identities = 130/183 (71%), Positives = 146/183 (79%)
 Frame = +1

Query: 52  VALKVMYFGQRFYGFGSEAHTDPTIESEIFKALAETRLVYGEKKGWQYSRCGRTDKGVSS 231
           VALKVMYFGQRFYGF SE   DPT+ESEIFKAL  TRL+ G+KK  QYSRCGRTDKGVS+
Sbjct: 104 VALKVMYFGQRFYGFSSEGQMDPTVESEIFKALERTRLLIGDKKEIQYSRCGRTDKGVSA 163

Query: 232 VGQVIALYLRSCHKVKDGNNGYSGELITDDLCEGELDYVQILNKVLPKDIRVMGWCPVPI 411
           VGQVIAL LRS  K  D      GE  +    EGE+DYV++LN+VLP DIR++GWCPVP 
Sbjct: 164 VGQVIALLLRSKVKDIDEIGKVFGETASQKHSEGEIDYVRVLNRVLPNDIRIIGWCPVPN 223

Query: 412 DFSARFSCLSREYKYFFWKANLNIVAMEAASTKLVGEHDFRNFCKMDAANVHNFRRRITL 591
           DFSARFSCLSREYKYFF   NLN++AME+A  K +GEHDFRNFCKMDA NVHN+RR IT 
Sbjct: 224 DFSARFSCLSREYKYFFRGDNLNLLAMESAGKKFIGEHDFRNFCKMDAMNVHNYRRNITS 283

Query: 592 FEI 600
           FEI
Sbjct: 284 FEI 286