BLASTX nr result

ID: Bupleurum21_contig00026134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026134
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40732.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]    72   6e-11
ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|NP_199195.4| pentatricopeptide repeat-containing protein [Ar...    65   8e-09
ref|XP_002510695.1| pentatricopeptide repeat-containing protein,...    64   1e-08

>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   LNNKLLTSNKVEIAYKLFMKIKVARQKENARKHWRSKGWHF 124
           LNNKLL SNKVE+AYKLF+KIK+ARQ +NAR+ WR  GWHF
Sbjct: 480 LNNKLLASNKVEMAYKLFLKIKIARQNDNARRFWRGNGWHF 520


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   LNNKLLTSNKVEIAYKLFMKIKVARQKENARKHWRSKGWHF 124
           LNNKLL SNKVE+AYKLF+KIK ARQ +NAR+ WR  GWHF
Sbjct: 521 LNNKLLASNKVEMAYKLFLKIKXARQNDNARRFWRGNGWHF 561


>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +2

Query: 2   LNNKLLTSNKVEIAYKLFMKIKVARQKENARKHWRSKGWHF 124
           LNNKLL SNKVE AY+LF+KIK AR  ENAR+ WRS GWHF
Sbjct: 523 LNNKLLASNKVERAYRLFLKIKHARHSENARRCWRSNGWHF 563


>ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g43820 gi|332007631|gb|AED95014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 546

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 2   LNNKLLTSNKVEIAYKLFMKIKVARQKENARKHWRSKGWHF 124
           L++KL+ SNK E+AYKLF+KIK AR  ENAR  WRS GWHF
Sbjct: 506 LSSKLMASNKTELAYKLFLKIKKARATENARSFWRSNGWHF 546


>ref|XP_002510695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551396|gb|EEF52882.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 195

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2

Query: 2   LNNKLLTSNKVEIAYKLFMKIKVARQKENARKHWRSKGWHF 124
           LNNKLL S+KVE AYKL++K++ AR  ENAR+ WR+ GWHF
Sbjct: 155 LNNKLLASSKVERAYKLYLKVRDARSNENARRFWRANGWHF 195


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