BLASTX nr result
ID: Bupleurum21_contig00026108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00026108
(567 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40106.3| unnamed protein product [Vitis vinifera] 210 1e-52
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi... 210 1e-52
emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera] 207 9e-52
ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|2... 196 3e-48
ref|XP_002520121.1| pentatricopeptide repeat-containing protein,... 186 2e-45
>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 210 bits (534), Expect = 1e-52
Identities = 98/169 (57%), Positives = 121/169 (71%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
+ ++L G L CQT+KL LDS+ FIGNV++TMYS +L EKDVISWN+
Sbjct: 214 TTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
I C CD HAKGL +F M VRPDDFTF+SAL ACAG+AS+ GKQ+H+HLMRT
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGFAN 59
RLY+D+GV NALV+MY+KCGCI YAY +F + +HN+VSWN II GF N
Sbjct: 334 RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGN 382
Score = 77.0 bits (188), Expect = 2e-12
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Frame = -3
Query: 544 GMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNSFITVCCQ 365
G+ L +K S F+ N ++ MY+ EK+++SW++ I+ Q
Sbjct: 22 GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81
Query: 364 CDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRTRLYEDIG 185
+ ++ +M + P+++ F+S ++ACA ++++ G+++HS ++ YE I
Sbjct: 82 AGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFG-YESIS 136
Query: 184 -VNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGF 65
V+N+L+SMY KC + A +VF N VS+N +ITGF
Sbjct: 137 FVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF 177
Score = 65.9 bits (159), Expect = 4e-09
Identities = 41/164 (25%), Positives = 75/164 (45%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
S + G + +++K +S SF+ N L++MY + E + +S+N+
Sbjct: 113 SLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNA 172
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
IT + +GL F +++ + PD F F L C +L +G +LH ++
Sbjct: 173 LITGFVENQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKL 231
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNII 74
L + N +++MYS+ I A F+ +V+SWN +I
Sbjct: 232 NLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 275
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = -3
Query: 289 TFSSALTACAGVASLPQGKQLHSHLMRTRLYEDIGVNNALVSMYSKCGCITYAYTVFKQQ 110
T SS L C+ +L G LH+ +++T D+ ++N +++MY+KCG T+A VF +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 109 GYHNVVSWNNIITGF 65
N+VSW+ +I+G+
Sbjct: 65 FEKNLVSWSAMISGY 79
>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 210 bits (534), Expect = 1e-52
Identities = 98/169 (57%), Positives = 121/169 (71%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
+ ++L G L CQT+KL LDS+ FIGNV++TMYS +L EKDVISWN+
Sbjct: 214 TTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
I C CD HAKGL +F M VRPDDFTF+SAL ACAG+AS+ GKQ+H+HLMRT
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGFAN 59
RLY+D+GV NALV+MY+KCGCI YAY +F + +HN+VSWN II GF N
Sbjct: 334 RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGN 382
Score = 77.0 bits (188), Expect = 2e-12
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Frame = -3
Query: 544 GMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNSFITVCCQ 365
G+ L +K S F+ N ++ MY+ EK+++SW++ I+ Q
Sbjct: 22 GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81
Query: 364 CDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRTRLYEDIG 185
+ ++ +M + P+++ F+S ++ACA ++++ G+++HS ++ YE I
Sbjct: 82 AGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFG-YESIS 136
Query: 184 -VNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGF 65
V+N+L+SMY KC + A +VF N VS+N +ITGF
Sbjct: 137 FVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF 177
Score = 65.9 bits (159), Expect = 4e-09
Identities = 41/164 (25%), Positives = 75/164 (45%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
S + G + +++K +S SF+ N L++MY + E + +S+N+
Sbjct: 113 SLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNA 172
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
IT + +GL F +++ + PD F F L C +L +G +LH ++
Sbjct: 173 LITGFVENQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKL 231
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNII 74
L + N +++MYS+ I A F+ +V+SWN +I
Sbjct: 232 NLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 275
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = -3
Query: 289 TFSSALTACAGVASLPQGKQLHSHLMRTRLYEDIGVNNALVSMYSKCGCITYAYTVFKQQ 110
T SS L C+ +L G LH+ +++T D+ ++N +++MY+KCG T+A VF +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 109 GYHNVVSWNNIITGF 65
N+VSW+ +I+G+
Sbjct: 65 FEKNLVSWSAMISGY 79
>emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
Length = 730
Score = 207 bits (527), Expect = 9e-52
Identities = 97/169 (57%), Positives = 120/169 (71%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
+ ++L G L CQT+KL LDS+ FIGNV++TMYS +L EKDVISWN+
Sbjct: 221 TTENLKRGTELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 280
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
I C CD HAKGL +F M VRPDDFTF+SAL ACAG+AS+ GKQ+H+HLMRT
Sbjct: 281 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 340
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGFAN 59
LY D+GV+NALV+MY+KCGCI YAY +F + +HN+VSWN II GF N
Sbjct: 341 SLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGN 389
Score = 80.9 bits (198), Expect = 1e-13
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Frame = -3
Query: 544 GMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNSFITVCCQ 365
G+ L +K S F+ N ++ MY+ EK+++SW++ I+ Q
Sbjct: 29 GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 88
Query: 364 CDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRTRLYEDIG 185
+ ++ +M + P+++ F+S ++ACA +++L QG+++HS ++ YE I
Sbjct: 89 AGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSALTQGQKIHSRSLKFG-YESIS 143
Query: 184 -VNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGF 65
V+N+L+SMY KC + A +VF N VS+N +ITGF
Sbjct: 144 FVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF 184
Score = 65.1 bits (157), Expect = 8e-09
Identities = 41/164 (25%), Positives = 74/164 (45%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
S L G + +++K +S SF+ N L++MY + E + +S+N+
Sbjct: 120 SLSALTQGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNA 179
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
IT + +G F +++ + PD F F L C +L +G +LH ++
Sbjct: 180 LITGFVENQQLERGFEFF-KLMXQQGLIPDRFAFMGVLGICTTTENLKRGTELHCQTVKL 238
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNII 74
L + N +++MYS+ I A F+ +V+SWN +I
Sbjct: 239 NLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 282
>ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|222854989|gb|EEE92536.1|
predicted protein [Populus trichocarpa]
Length = 583
Score = 196 bits (497), Expect = 3e-48
Identities = 92/169 (54%), Positives = 120/169 (71%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
S DL G L CQTIKLKL+S++FIGN+++TMYS +L EKD+ISWN+
Sbjct: 214 SRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNT 273
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
FI+ C C+ H K L F EMLN VRPD+FTF+SAL AC+G+AS+ GKQ+H HL+RT
Sbjct: 274 FISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRT 333
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGFAN 59
RLY+D+G NAL++MY+KCGCI AY +F + + N+VSWN +I GF N
Sbjct: 334 RLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGN 382
Score = 75.1 bits (183), Expect = 7e-12
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Frame = -3
Query: 538 GLPCQTIKLKLDSSS--FIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNSFITVCCQ 365
GLP I +K + S + N ++ +Y+ E++++SW++ I+ Q
Sbjct: 22 GLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQ 81
Query: 364 CDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRTRLYEDIG 185
L +F ++ + P+++ ++S ++ACA + L QGKQ+H ++ L
Sbjct: 82 IGEPISALGLFSKL----NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSF 137
Query: 184 VNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGF 65
V+NAL++MY KCG + A + + N V++N +ITGF
Sbjct: 138 VSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGF 177
Score = 70.5 bits (171), Expect = 2e-10
Identities = 46/165 (27%), Positives = 74/165 (44%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
S + LV G + Q +K LDS SF+ N L+TMY E + +++N+
Sbjct: 113 SLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNA 172
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
IT + KG + M+ PD FTF L C L +G+ LH ++
Sbjct: 173 LITGFVENQQPDKGFEVL-RMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKL 231
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIIT 71
+L + N +++MYSK + A F+ +++SWN I+
Sbjct: 232 KLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFIS 276
>ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540613|gb|EEF42176.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 589
Score = 186 bits (472), Expect = 2e-45
Identities = 88/169 (52%), Positives = 115/169 (68%)
Frame = -3
Query: 565 SAQDLVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNS 386
S D GM L CQ IKL L+ S+FIGNV++TMYS F+L EKD+ISWN+
Sbjct: 214 SYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNT 273
Query: 385 FITVCCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRT 206
+T CC C H + L +F +ML+ V+PDDFTF+ L ACAG+AS+ GKQ+H HL+RT
Sbjct: 274 LVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRT 333
Query: 205 RLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGFAN 59
R Y+D+GV+NALV+MY+KCG I +Y VF++ N+VSWN II F N
Sbjct: 334 RQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGN 382
Score = 79.0 bits (193), Expect = 5e-13
Identities = 45/160 (28%), Positives = 80/160 (50%)
Frame = -3
Query: 544 GMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNSFITVCCQ 365
G+ L +K + S + N ++ +YS +++++SW++ I+ Q
Sbjct: 22 GLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQ 81
Query: 364 CDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRTRLYEDIG 185
L++F +M + P+++ F+S ++ACA + +L QG Q+H+ ++
Sbjct: 82 TGQPLLALNLFSQM----RIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSF 137
Query: 184 VNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIITGF 65
V+NAL+SMY KCG T A V N VS+N +I GF
Sbjct: 138 VSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGF 177
Score = 75.5 bits (184), Expect = 6e-12
Identities = 46/161 (28%), Positives = 76/161 (47%)
Frame = -3
Query: 553 LVTGMGLPCQTIKLKLDSSSFIGNVLMTMYSTFSLXXXXXXXXXXXXEKDVISWNSFITV 374
L G+ + Q++KL S SF+ N L++MY L E + +S+N+ I
Sbjct: 117 LSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAG 176
Query: 373 CCQCDSHAKGLSIFCEMLNGVTVRPDDFTFSSALTACAGVASLPQGKQLHSHLMRTRLYE 194
+ KG+ F +++ PD FTFS L C +G QLH +++ L +
Sbjct: 177 FVENQQPEKGIEAF-KVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLED 235
Query: 193 DIGVNNALVSMYSKCGCITYAYTVFKQQGYHNVVSWNNIIT 71
+ N +++MYSK I A VF +++SWN ++T
Sbjct: 236 SAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVT 276
Score = 58.5 bits (140), Expect = 7e-07
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 280 SALTACAGVASLPQGKQLHSHLMRTRLYEDIGVNNALVSMYSKCGCITYAYTVFKQQGYH 101
S L CA + + G LH+ ++T + DI V+N ++++YSKCG + +A +F +
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67
Query: 100 NVVSWNNIITGF 65
N+VSW+ II+G+
Sbjct: 68 NLVSWSAIISGY 79