BLASTX nr result

ID: Bupleurum21_contig00026104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026104
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004563855.1| ATP synthase CF0 subunit IV [Nelumbo lutea] ...   174   1e-41
ref|YP_319753.1| ATP synthase CF0 A subunit [Acorus calamus] gi|...   173   2e-41
gb|AEZ01415.1| ATP synthase CF0 subunit IV (chloroplast) [Japono...   172   3e-41
gb|AEJ10129.1| ATP synthase CF0 subunit IV [Neoastelia spectabilis]   172   3e-41
ref|YP_001294086.1| ATP synthase CF0 subunit IV [Chloranthus spi...   172   3e-41

>ref|YP_004563855.1| ATP synthase CF0 subunit IV [Nelumbo lutea]
           gi|334362037|ref|YP_004564091.1| ATP synthase CF0
           subunit IV [Nelumbo nucifera]
           gi|224474122|gb|ACN49311.1| ATP synthase CF0 subunit IV
           [Nelumbo lutea] gi|224474210|gb|ACN49396.1| ATP synthase
           CF0 subunit IV [Nelumbo nucifera]
           gi|290490280|gb|ADD31547.1| ATP synthase CF0 subunit IV
           protein [Nelumbo nucifera] gi|383286785|gb|AFH01435.1|
           ATP synthase CF0 subunit IV (chloroplast) [Nelumbo
           nucifera] gi|383286880|gb|AFH01529.1| ATP synthase CF0
           subunit IV (chloroplast) [Nelumbo lutea]
          Length = 247

 Score =  174 bits (440), Expect = 1e-41
 Identities = 96/135 (71%), Positives = 102/135 (75%), Gaps = 5/135 (3%)
 Frame = +1

Query: 172 ATGNPQTIPTSGKKFFEYVLEFI*DASKTQIGEEYGHWVPFIGTMFLFILVSNWSECF-- 345
           A  NPQTIPT+G+ FFEYVLEFI D SKTQIGEEYG WVPFIGTMFLFI VSNWS     
Sbjct: 57  AVRNPQTIPTAGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLP 116

Query: 346 --YLEKSYNYLMKVN*HANDINTLVALALPTSVA*FYLGLAKK*L-YFRKYIQPTPILLP 516
              +E  +  L       NDINT VALALPTSVA FY GL+KK L YF KYIQPTPILLP
Sbjct: 117 WKIIELPHGELAA---PTNDINTTVALALPTSVAYFYAGLSKKGLGYFAKYIQPTPILLP 173

Query: 517 INIFEDFSKPLSLSF 561
           INI EDF+KPLSLSF
Sbjct: 174 INILEDFTKPLSLSF 188


>ref|YP_319753.1| ATP synthase CF0 A subunit [Acorus calamus]
           gi|161622298|ref|YP_001586170.1| ATP synthase CF0 A
           subunit [Acorus americanus]
           gi|122227063|sp|Q3V546.1|ATPI_ACOCL RecName: Full=ATP
           synthase subunit a, chloroplastic; AltName: Full=ATP
           synthase F0 sector subunit a; AltName: Full=F-ATPase
           subunit IV gi|122239710|sp|Q4FGF8.1|ATPI_ACOAM RecName:
           Full=ATP synthase subunit a, chloroplastic; AltName:
           Full=ATP synthase F0 sector subunit a; AltName:
           Full=F-ATPase subunit IV gi|69215161|gb|AAZ03817.1| ATP
           synthase CF0 A chain [Acorus americanus]
           gi|74381697|emb|CAI53782.1| ATPase a subunit [Acorus
           calamus] gi|160369841|gb|ABX38732.1| ATP synthase CF0
           subunit IV [Acorus americanus]
          Length = 247

 Score =  173 bits (438), Expect = 2e-41
 Identities = 96/135 (71%), Positives = 101/135 (74%), Gaps = 5/135 (3%)
 Frame = +1

Query: 172 ATGNPQTIPTSGKKFFEYVLEFI*DASKTQIGEEYGHWVPFIGTMFLFILVSNWSECF-- 345
           A  NPQTIPT+G+ FFEYVLEFI D SKTQIGEEYG WVPFIGTMFLFI VSNWS     
Sbjct: 57  AVRNPQTIPTNGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLP 116

Query: 346 --YLEKSYNYLMKVN*HANDINTLVALALPTSVA*FYLGLAKK*L-YFRKYIQPTPILLP 516
              +E  +  L       NDINT VALALPTSVA FY GL KK L YF KYIQPTPILLP
Sbjct: 117 WKLIELPHGELAA---PTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLP 173

Query: 517 INIFEDFSKPLSLSF 561
           INI EDF+KPLSLSF
Sbjct: 174 INILEDFTKPLSLSF 188


>gb|AEZ01415.1| ATP synthase CF0 subunit IV (chloroplast) [Japonolirion osense]
          Length = 247

 Score =  172 bits (437), Expect = 3e-41
 Identities = 95/132 (71%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = +1

Query: 172 ATGNPQTIPTSGKKFFEYVLEFI*DASKTQIGEEYGHWVPFIGTMFLFILVSNWSECFYL 351
           A  NPQTIPT G+ FFEYVLEFI D SKTQIGEEYG WVPFIGTMFLFI VSNWS     
Sbjct: 57  AVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLP 116

Query: 352 EKSYNYLM-KVN*HANDINTLVALALPTSVA*FYLGLAKK*L-YFRKYIQPTPILLPINI 525
            K       ++    NDINT VALALPTSVA FY GL KK L YF KYIQPTPILLPINI
Sbjct: 117 RKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINI 176

Query: 526 FEDFSKPLSLSF 561
            EDF+KPLSLSF
Sbjct: 177 LEDFTKPLSLSF 188


>gb|AEJ10129.1| ATP synthase CF0 subunit IV [Neoastelia spectabilis]
          Length = 247

 Score =  172 bits (437), Expect = 3e-41
 Identities = 95/132 (71%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = +1

Query: 172 ATGNPQTIPTSGKKFFEYVLEFI*DASKTQIGEEYGHWVPFIGTMFLFILVSNWSECFYL 351
           A  NPQTIPT G+ FFEYVLEFI D SKTQIGEEYG WVPFIGTMFLFI VSNWS     
Sbjct: 57  AVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLP 116

Query: 352 EKSYNYLM-KVN*HANDINTLVALALPTSVA*FYLGLAKK*L-YFRKYIQPTPILLPINI 525
            K       ++    NDINT VALALPTSVA FY GL KK L YF KYIQPTPILLPINI
Sbjct: 117 RKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINI 176

Query: 526 FEDFSKPLSLSF 561
            EDF+KPLSLSF
Sbjct: 177 LEDFTKPLSLSF 188


>ref|YP_001294086.1| ATP synthase CF0 subunit IV [Chloranthus spicatus]
           gi|223635010|sp|A6MMB0.1|ATPI_CHLSC RecName: Full=ATP
           synthase subunit a, chloroplastic; AltName: Full=ATP
           synthase F0 sector subunit a; AltName: Full=F-ATPase
           subunit IV gi|146744176|gb|ABQ43248.1| ATP synthase CF0
           subunit IV [Chloranthus spicatus]
          Length = 247

 Score =  172 bits (437), Expect = 3e-41
 Identities = 95/132 (71%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = +1

Query: 172 ATGNPQTIPTSGKKFFEYVLEFI*DASKTQIGEEYGHWVPFIGTMFLFILVSNWSECFYL 351
           A  NPQTIPT G+ FFEYVLEFI D SKTQIGEEYG WVPFIGTMFLFI VSNWS     
Sbjct: 57  AVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLP 116

Query: 352 EKSYNYLM-KVN*HANDINTLVALALPTSVA*FYLGLAKK*L-YFRKYIQPTPILLPINI 525
            K       ++    NDINT VALALPTSVA FY GL KK L YF KYIQPTPILLPINI
Sbjct: 117 RKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINI 176

Query: 526 FEDFSKPLSLSF 561
            EDF+KPLSLSF
Sbjct: 177 LEDFTKPLSLSF 188


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