BLASTX nr result

ID: Bupleurum21_contig00026095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026095
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...   126   2e-27
gb|ACF74325.1| unknown [Arachis hypogaea]                             122   2e-26
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...   122   3e-26
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab...   119   3e-25
ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein ...   117   1e-24

>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/92 (68%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
 Frame = +3

Query: 48  YRWITSRHSSSKLFVG--GLSYDTNETLLKDAFDHHGEIVEVKVICDHVTGKSKGYGFVQ 221
           +RW+ SR S  KLF+G  GLSYDTNET+LKDAF  +GEI+EVKVICDHV+GKSKGYGFVQ
Sbjct: 17  FRWLVSRGSCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQ 76

Query: 222 FTCKNAASKAVDEMNDKLLDGRNIRVHYALKG 317
           FT  + A  A+ EM+ + LDGRNIRV YA KG
Sbjct: 77  FTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 108


>gb|ACF74325.1| unknown [Arachis hypogaea]
          Length = 112

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/96 (59%), Positives = 75/96 (78%)
 Frame = +3

Query: 27  YNSTCLYYRWITSRHSSSKLFVGGLSYDTNETLLKDAFDHHGEIVEVKVICDHVTGKSKG 206
           + ++C +   +  RHSS+ L V GLSYDTNET+L+DAF+ HGE++EVKVICDHVTGKSKG
Sbjct: 15  FKNSCPFSPLLFPRHSSTNLLVTGLSYDTNETVLRDAFEQHGELIEVKVICDHVTGKSKG 74

Query: 207 YGFVQFTCKNAASKAVDEMNDKLLDGRNIRVHYALK 314
           YGFV+FT + +A+    EM+ K++DGR IRV YA K
Sbjct: 75  YGFVRFTTETSAATGRKEMHKKIIDGRRIRVCYAHK 110


>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/83 (69%), Positives = 68/83 (81%)
 Frame = +3

Query: 69  HSSSKLFVGGLSYDTNETLLKDAFDHHGEIVEVKVICDHVTGKSKGYGFVQFTCKNAASK 248
           HSS+KLFV GLSYDTNE +L+DAF  HGEI+EVKVICDHVTGKS+GYGFV+F  +  A+ 
Sbjct: 55  HSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAA 114

Query: 249 AVDEMNDKLLDGRNIRVHYALKG 317
           A  EMN ++LDGR IRV YA KG
Sbjct: 115 ARKEMNGQILDGRRIRVSYAHKG 137


>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
           lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
           ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/86 (65%), Positives = 71/86 (82%)
 Frame = +3

Query: 51  RWITSRHSSSKLFVGGLSYDTNETLLKDAFDHHGEIVEVKVICDHVTGKSKGYGFVQFTC 230
           R++T R S SKLFVGGLSYDTNE +LK+ F+ +GE++EVKVICDH +GKSKGYGFV F  
Sbjct: 17  RYLTIRGSCSKLFVGGLSYDTNEPVLKNEFEKYGEVIEVKVICDHKSGKSKGYGFVLFDS 76

Query: 231 KNAASKAVDEMNDKLLDGRNIRVHYA 308
           + AA+ A+  MN++LL+GRNIRV YA
Sbjct: 77  EEAAASALASMNNQLLEGRNIRVEYA 102


>ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 146

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/83 (68%), Positives = 66/83 (79%)
 Frame = +3

Query: 69  HSSSKLFVGGLSYDTNETLLKDAFDHHGEIVEVKVICDHVTGKSKGYGFVQFTCKNAASK 248
           HSS KLFV GLSYDTNE +L+DAF  HGEI+EVKVICDHVTGKS+GYGFV+F  +  A+ 
Sbjct: 55  HSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAA 114

Query: 249 AVDEMNDKLLDGRNIRVHYALKG 317
              EMN ++LDGR IRV YA KG
Sbjct: 115 THKEMNGQILDGRCIRVSYAHKG 137


Top