BLASTX nr result

ID: Bupleurum21_contig00026091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026091
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326472.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002303376.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002531784.1| transferase, putative [Ricinus communis] gi|...    57   2e-06
ref|XP_002873068.1| hypothetical protein ARALYDRAFT_324948 [Arab...    57   2e-06

>ref|XP_002326472.1| predicted protein [Populus trichocarpa] gi|222833794|gb|EEE72271.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +1

Query: 82  ATTLCPKLSIEALLSVNPHKPTDPRVPHKIMVED-TSCGIFQRRFQMILYYKKTTSVPDK 258
           A+    K+ IEA+ +V+P   TDPR    + V+D     IF+    ++LYY K     + 
Sbjct: 7   ASEFARKVQIEAVQTVSPSSVTDPREICLVSVKDPVGSNIFRGCLNIVLYYNKAGE--ED 64

Query: 259 SGWLVAGRMKETLGEVLSDHPHFAG 333
           SGWLVAG +KE+LG VLSD P   G
Sbjct: 65  SGWLVAGWIKESLGRVLSDQPMLGG 89


>ref|XP_002303376.1| predicted protein [Populus trichocarpa] gi|222840808|gb|EEE78355.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +1

Query: 100 KLSIEALLSVNPHKPTDPRVPHKIMVED-TSCGIFQRRFQMILYYKKTTSVPDKSGWLVA 276
           K+ IE + +V P K TDPR    + V+D  S  IFQ    ++L Y K  +V + SGWLVA
Sbjct: 13  KVQIEGVQTVAPSKVTDPRETCLVSVKDPVSSDIFQGCLSIVLCYNK--AVEEDSGWLVA 70

Query: 277 GRMKETLGEVLSDHPHFAG 333
           G +KE+LG  L D P  +G
Sbjct: 71  GWIKESLGRALQDQPMLSG 89


>ref|XP_002531784.1| transferase, putative [Ricinus communis]
           gi|223528577|gb|EEF30598.1| transferase, putative
           [Ricinus communis]
          Length = 373

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = +1

Query: 85  TTLCPKLSIEALLSVNPHKPTDPRVPHKIMV--EDTSCGIFQRRFQMILYYKKTTSVPDK 258
           T + PK  IEA+ +V P   TDPR   ++ V  E    GIF+  F ++L Y K  ++   
Sbjct: 9   TNVVPKPQIEAIQTVPPFVVTDPRQFRQVSVAKEPIGSGIFKGCFNIVLCYNK--AMEKD 66

Query: 259 SGWLVAGRMKETLGEVLSDHPHFAG 333
           SGWLVAG +KE+L   L + P  +G
Sbjct: 67  SGWLVAGWIKESLARALKEQPLLSG 91


>ref|XP_002873068.1| hypothetical protein ARALYDRAFT_324948 [Arabidopsis lyrata subsp.
           lyrata] gi|297318905|gb|EFH49327.1| hypothetical protein
           ARALYDRAFT_324948 [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = +1

Query: 88  TLCPKLSIEALLSVNPHKPTDPRVPHKIMVED-TSCGIFQRRFQMILYYKKTTSVPDKSG 264
           T  PK  I  + SV P + T  R    I V D    GIF+R   ++ YYK+     D+ G
Sbjct: 3   TKIPKSMIAGVQSVMPVEVTRHREIRSISVVDPVGVGIFRRTLNIVTYYKEACDSGDERG 62

Query: 265 WLVAGRMKETLGEVLSDHPHFAG 333
           WL AG +KE+LG  L++ P  +G
Sbjct: 63  WLAAGWIKESLGRALTEQPMLSG 85


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