BLASTX nr result

ID: Bupleurum21_contig00026090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026090
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...    82   5e-14
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote...    82   6e-14
ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
emb|CBI34365.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...    80   1e-13

>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223549733|gb|EEF51221.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 204

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = -1

Query: 141 DVVNPGNNLYVTGLSTRVTSRDLEKFFGNEGKVTECHLVMDPHTKES 1
           D  NPGNNLYVTGLSTRVT+ DLEK+FG EGKV ECHLV DP T+ES
Sbjct: 41  DAANPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRES 87


>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Glycine max]
          Length = 191

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = -1

Query: 141 DVVNPGNNLYVTGLSTRVTSRDLEKFFGNEGKVTECHLVMDPHTKES 1
           DV NPGNNLYVTGLSTR+T  DL K+F  EGKV +CHLV DPHTKES
Sbjct: 40  DVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKES 86


>ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|222841942|gb|EEE79489.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = -1

Query: 141 DVVNPGNNLYVTGLSTRVTSRDLEKFFGNEGKVTECHLVMDPHTKES 1
           D  NPGNNLYVTGLSTRVTS DLEK+F +EGKV ECHLV DP T+ES
Sbjct: 42  DASNPGNNLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRES 88


>emb|CBI34365.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -1

Query: 141 DVVNPGNNLYVTGLSTRVTSRDLEKFFGNEGKVTECHLVMDPHTKES 1
           D VNPGNNLYVTGLSTRV + DLEK+F +EGKV ECHLV DP T+ES
Sbjct: 48  DAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRES 94


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
           vinifera]
          Length = 211

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -1

Query: 141 DVVNPGNNLYVTGLSTRVTSRDLEKFFGNEGKVTECHLVMDPHTKES 1
           D VNPGNNLYVTGLSTRV + DLEK+F +EGKV ECHLV DP T+ES
Sbjct: 48  DAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRES 94


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