BLASTX nr result

ID: Bupleurum21_contig00026062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026062
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152266.1| PREDICTED: zinc finger SWIM domain-containin...    53   1e-06
ref|XP_002272459.1| PREDICTED: zinc finger SWIM domain-containin...    51   2e-06

>ref|XP_004152266.1| PREDICTED: zinc finger SWIM domain-containing protein 7-like
           [Cucumis sativus] gi|449484320|ref|XP_004156850.1|
           PREDICTED: zinc finger SWIM domain-containing protein
           7-like [Cucumis sativus]
          Length = 132

 Score = 52.8 bits (125), Expect(3) = 1e-06
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -2

Query: 447 GSYLSCKHHVAVRLASST*LCVDVKVSDEQLAVLLSNL 334
           G  L CKH +A RLA+S   C++VKVSDE+LA+LLSNL
Sbjct: 95  GEQLCCKHQLAARLAASVGACIEVKVSDEELAILLSNL 132



 Score = 23.1 bits (48), Expect(3) = 1e-06
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 475 FFYDIVKNGRQL 440
           FFYDIV  G QL
Sbjct: 87  FFYDIVNRGEQL 98



 Score = 21.2 bits (43), Expect(3) = 1e-06
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 533 PRQIHLCHVMGDSDRKEEY 477
           P    +  V+G+S RKEEY
Sbjct: 56  PSTRSIFQVVGESRRKEEY 74


>ref|XP_002272459.1| PREDICTED: zinc finger SWIM domain-containing protein 7 [Vitis
           vinifera] gi|296083085|emb|CBI22489.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score = 51.2 bits (121), Expect(3) = 2e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 447 GSYLSCKHHVAVRLASST*LCVDVKVSDEQLAVLLSNL 334
           G  L CKH +A RLA+S   CV+VKVSDEQLA+LLS L
Sbjct: 95  GEQLCCKHQLAARLAASVGACVEVKVSDEQLALLLSKL 132



 Score = 23.1 bits (48), Expect(3) = 2e-06
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 475 FFYDIVKNGRQL 440
           FFYDIV  G QL
Sbjct: 87  FFYDIVNRGEQL 98



 Score = 22.3 bits (46), Expect(3) = 2e-06
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 536 QPRQIHLCHVMGDSDRKEEYF 474
           +P    +  V+G+S +KEEYF
Sbjct: 55  EPSGRWIFQVVGESRKKEEYF 75


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