BLASTX nr result

ID: Bupleurum21_contig00026047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026047
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331380.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|XP_002525668.1| conserved hypothetical protein [Ricinus comm...    84   4e-14
ref|XP_002889464.1| hypothetical protein ARALYDRAFT_470333 [Arab...    82   1e-13
ref|XP_002266869.1| PREDICTED: uncharacterized protein LOC100254...    82   1e-13
emb|CBI39459.3| unnamed protein product [Vitis vinifera]               82   1e-13

>ref|XP_002331380.1| predicted protein [Populus trichocarpa] gi|222873594|gb|EEF10725.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 243 YPIC*IPNIGIHVKDFEAAFLTFHTFSSFYQDAAEEYIYSRTDNQSISLTPFGCAMYKFR 422
           YPI  IP+ G + KD  + FLT+HT SS +QD   E       N  ISL PFG A YK +
Sbjct: 229 YPIYHIPSQG-NEKDLSSCFLTYHTLSSSFQDCVNE---DGEGNVCISLPPFGLATYKLQ 284

Query: 423 GDVWLN-NLSDRMKLYDLKCAADSWIK*LGFEHHDYQFFVSKQ 548
           G++W+N   SD  ++  L+ AADSW+K L   HHDY FF S Q
Sbjct: 285 GNLWINPETSDDERMIYLESAADSWLKQLNVHHHDYSFFTSCQ 327


>ref|XP_002525668.1| conserved hypothetical protein [Ricinus communis]
           gi|223535104|gb|EEF36786.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = +3

Query: 243 YPIC*IPNIGIHVKDFEAAFLTFHTFSSFYQDAAEEYIYSRT-DNQSISLTPFGCAMYKF 419
           YPI  IP+   + KD    FLT+HT SS +QD   E    +T D+  I L PFG A YK 
Sbjct: 221 YPIYQIPSRR-NEKDLSTCFLTYHTLSSSFQDCGNEQDEPKTKDSGGILLHPFGMATYKM 279

Query: 420 RGDVWLN-NLSDRMKLYDLKCAADSWIK*LGFEHHDYQFF 536
           +GD+W+N   SD  ++  L  AADSW+K L   HHDY FF
Sbjct: 280 QGDLWVNPETSDHERINCLCSAADSWLKQLDIHHHDYNFF 319


>ref|XP_002889464.1| hypothetical protein ARALYDRAFT_470333 [Arabidopsis lyrata subsp.
           lyrata] gi|297335306|gb|EFH65723.1| hypothetical protein
           ARALYDRAFT_470333 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
 Frame = +3

Query: 243 YPIC*IPNIGIHVKDFEAAFLTFHTFSSFYQDAAEEYIYS-----RTDNQSISLTPFGCA 407
           YPI  IP +G  +KD    FLT+HT SS +QD   E         R + + I+L PFG A
Sbjct: 197 YPIYHIP-MGRTIKDLSTCFLTYHTLSSSFQDMEPEENGGDKERVRREGEDITLLPFGMA 255

Query: 408 MYKFRGDVWLN-NLSDRMKLYDLKCAADSWIK*LGFEHHDYQFFVS 542
            YK +GDVWL+ +  D+ +L  L   ADSW+K L  +HHD+ +F S
Sbjct: 256 TYKMQGDVWLSQDHDDQERLASLYSVADSWLKQLRVQHHDFNYFCS 301


>ref|XP_002266869.1| PREDICTED: uncharacterized protein LOC100254880 [Vitis vinifera]
          Length = 334

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
 Frame = +3

Query: 243 YPIC*IPNIGIHVKDFEAAFLTFHTFSSFYQDAAEEYIYSRTDNQS-------------- 380
           YPI  IP +G +VKD    FLT+HT SS +QD   +        +S              
Sbjct: 216 YPIYHIP-LGRNVKDLSTCFLTYHTLSSSFQDVVVDVDDDGDKRKSSFCREGESKGERSS 274

Query: 381 -ISLTPFGCAMYKFRGDVWLN-NLSDRMKLYDLKCAADSWIK*LGFEHHDYQFFVS 542
            +SL PFG A YK +G++W+    SD  K+  L CAADSW+K L  +HHDY FF S
Sbjct: 275 RVSLHPFGLATYKMQGNLWIKPQTSDHEKMVYLHCAADSWLKQLRADHHDYFFFTS 330


>emb|CBI39459.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
 Frame = +3

Query: 243 YPIC*IPNIGIHVKDFEAAFLTFHTFSSFYQDAAEEYIYSRTDNQS-------------- 380
           YPI  IP +G +VKD    FLT+HT SS +QD   +        +S              
Sbjct: 219 YPIYHIP-LGRNVKDLSTCFLTYHTLSSSFQDVVVDVDDDGDKRKSSFCREGESKGERSS 277

Query: 381 -ISLTPFGCAMYKFRGDVWLN-NLSDRMKLYDLKCAADSWIK*LGFEHHDYQFFVS 542
            +SL PFG A YK +G++W+    SD  K+  L CAADSW+K L  +HHDY FF S
Sbjct: 278 RVSLHPFGLATYKMQGNLWIKPQTSDHEKMVYLHCAADSWLKQLRADHHDYFFFTS 333


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