BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026026
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       201   2e-49
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   197   2e-48
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           193   4e-47
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   193   4e-47
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   192   6e-47

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  201 bits (510), Expect = 2e-49
 Identities = 96/203 (47%), Positives = 132/203 (65%)
 Frame = -3

Query: 609  EDIFNTLKGMAKRKSPGPDGFPVEFFLSNWGTVGKEVTSACLHFFNTCHLPRIINATAIT 430
            EDI   L  + + KS GPDGF  EFF+ +W  VG EVT A   FF++  L +  NAT I 
Sbjct: 450  EDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIV 509

Query: 429  LVPKQESPSSWNHFRPISCCNVIYKCISKIFASRLQLAVSKLVSPAQAAFIPGRVIGDHI 250
            L+PK  +P+  + FRPISC N +YK I+++   RLQ  +S ++S AQ+AF+PGR + +++
Sbjct: 510  LIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENV 569

Query: 249  ALAQSLCKGYHLNNGPPRGLLKLDLHKAFDSLNWSFLFKTLEVMGFPQIFINWIVACVST 70
             LA  L  GY+ +N  PRG+LK+DL KAFDS+ W F+   L  +  P+ FINWI  C+ST
Sbjct: 570  LLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCIST 629

Query: 69   PMFSIKVNGSLQGFFKGQSGLRQ 1
            P F++ +NG   GFFK   GLRQ
Sbjct: 630  PTFTVSINGGNGGFFKSTKGLRQ 652


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  197 bits (501), Expect = 2e-48
 Identities = 94/207 (45%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
 Frame = -3

Query: 609  EDIFNTLKGMAKRKSPGPDGFPVEFFLSNWGTVGKEVTSACLHFFNTCHLPRIINATAIT 430
            +DI +        K+ GPDGFPVEFF   W  +G EVT A   FF +  L +  NAT + 
Sbjct: 399  QDIKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLV 458

Query: 429  LVPKQESPSSWNHFRPISCCN----VIYKCISKIFASRLQLAVSKLVSPAQAAFIPGRVI 262
            L+PK  + S  N FRPISC +     +YK I+++  +RLQ  +S+++SP Q+AF+PGR +
Sbjct: 459  LIPKITNASKMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFL 518

Query: 261  GDHIALAQSLCKGYHLNNGPPRGLLKLDLHKAFDSLNWSFLFKTLEVMGFPQIFINWIVA 82
             +++ LA  L +GY+  N  PRG+LK+DL KAFDS+ W F+   L+ +G P  F+ WI  
Sbjct: 519  AENVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQ 578

Query: 81   CVSTPMFSIKVNGSLQGFFKGQSGLRQ 1
            C+STP FS+ VNG+  GFFK   GLRQ
Sbjct: 579  CISTPTFSVCVNGNTGGFFKSTRGLRQ 605


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  193 bits (490), Expect = 4e-47
 Identities = 96/247 (38%), Positives = 148/247 (59%), Gaps = 4/247 (1%)
 Frame = -3

Query: 729  VNHFSSILGRTHD-VSDFPEDLNVPIM---DETLAAVMQKPLCPEDIFNTLKGMAKRKSP 562
            V ++  +LG      S   ED+N+ +     +   + ++K    ++I    K + + K+ 
Sbjct: 266  VTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTS 325

Query: 561  GPDGFPVEFFLSNWGTVGKEVTSACLHFFNTCHLPRIINATAITLVPKQESPSSWNHFRP 382
            GPDG+ VEFF   W  +G EV +A   FF++  L +  NAT + L+PK  +  + + FRP
Sbjct: 326  GPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRP 385

Query: 381  ISCCNVIYKCISKIFASRLQLAVSKLVSPAQAAFIPGRVIGDHIALAQSLCKGYHLNNGP 202
            ISC N +YK ISK+  SRLQ  +S ++  +Q+AF+PGR + +++ LA  +  GY+  N  
Sbjct: 386  ISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNIS 445

Query: 201  PRGLLKLDLHKAFDSLNWSFLFKTLEVMGFPQIFINWIVACVSTPMFSIKVNGSLQGFFK 22
            PRG+LK+DL KAFDS+ W F+   L  +  P+ +INWI  C++TP F+I VNG+  GFF+
Sbjct: 446  PRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFR 505

Query: 21   GQSGLRQ 1
               GLRQ
Sbjct: 506  STKGLRQ 512


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  193 bits (490), Expect = 4e-47
 Identities = 96/247 (38%), Positives = 148/247 (59%), Gaps = 4/247 (1%)
 Frame = -3

Query: 729  VNHFSSILGRTHD-VSDFPEDLNVPIM---DETLAAVMQKPLCPEDIFNTLKGMAKRKSP 562
            V ++  +LG      S   ED+N+ +     +   + ++K    ++I    K + + K+ 
Sbjct: 266  VTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTS 325

Query: 561  GPDGFPVEFFLSNWGTVGKEVTSACLHFFNTCHLPRIINATAITLVPKQESPSSWNHFRP 382
            GPDG+ VEFF   W  +G EV +A   FF++  L +  NAT + L+PK  +  + + FRP
Sbjct: 326  GPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRP 385

Query: 381  ISCCNVIYKCISKIFASRLQLAVSKLVSPAQAAFIPGRVIGDHIALAQSLCKGYHLNNGP 202
            ISC N +YK ISK+  SRLQ  +S ++  +Q+AF+PGR + +++ LA  +  GY+  N  
Sbjct: 386  ISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNIS 445

Query: 201  PRGLLKLDLHKAFDSLNWSFLFKTLEVMGFPQIFINWIVACVSTPMFSIKVNGSLQGFFK 22
            PRG+LK+DL KAFDS+ W F+   L  +  P+ +INWI  C++TP F+I VNG+  GFF+
Sbjct: 446  PRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFR 505

Query: 21   GQSGLRQ 1
               GLRQ
Sbjct: 506  STKGLRQ 512


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  192 bits (488), Expect = 6e-47
 Identities = 91/211 (43%), Positives = 130/211 (61%)
 Frame = -3

Query: 633  VMQKPLCPEDIFNTLKGMAKRKSPGPDGFPVEFFLSNWGTVGKEVTSACLHFFNTCHLPR 454
            ++ + +  E+I   L  M   KSPGPDG+  EFF + W   G +  +A   FF    LP+
Sbjct: 745  ILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPK 804

Query: 453  IINATAITLVPKQESPSSWNHFRPISCCNVIYKCISKIFASRLQLAVSKLVSPAQAAFIP 274
             +NAT + L+PK++       +RPISCCNV+YK ISKI A+RL+L +   +   Q+AF+ 
Sbjct: 805  GLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVK 864

Query: 273  GRVIGDHIALAQSLCKGYHLNNGPPRGLLKLDLHKAFDSLNWSFLFKTLEVMGFPQIFIN 94
             R++ +++ LA  L K YH  +  PR  +K+D+ KAFDS+ W FL  TLE + FP+ F +
Sbjct: 865  ERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRH 924

Query: 93   WIVACVSTPMFSIKVNGSLQGFFKGQSGLRQ 1
            WI  C+ST  FS++VNG L GFF    GLRQ
Sbjct: 925  WIKLCISTATFSVQVNGELAGFFGSSRGLRQ 955