BLASTX nr result

ID: Bupleurum21_contig00026021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026021
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus ...   133   2e-29
gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus ...   100   1e-19
emb|CBI27718.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferas...    90   2e-16
ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa] ...    87   2e-15

>gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
          Length = 1545

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/87 (72%), Positives = 75/87 (86%)
 Frame = -2

Query: 426 YIYNHLVGLDKTSKETDQLFLELPVLVALRDESNKHGDPSLRRVPSKNGTLTINPKIRDN 247
           +IYN LVGLD+TSK+TDQ FLELPVL+ALR+ES+KHGDPS+ +V S NGTLTI PKI+D 
Sbjct: 262 FIYNQLVGLDETSKKTDQQFLELPVLIALREESSKHGDPSIGKVASTNGTLTIGPKIKDG 321

Query: 246 GNKKDSGTDEEEDGKMARLLHEEEFWN 166
            NKKDS T+E+E  K+ARLL EEEFWN
Sbjct: 322 ENKKDSATEEDEGVKVARLLQEEEFWN 348


>gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
          Length = 1761

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = -2

Query: 426 YIYNHLVGLDKTSKETDQLFLELPVLVALRDESNKHGDPSLRRVPSKNGTLTINPKIRDN 247
           +IYN LVGLD+TSK+ DQ FLELPVLVALRDES++H +    R+   NGTL    KIRDN
Sbjct: 478 FIYNQLVGLDETSKD-DQQFLELPVLVALRDESSRHVNDFQERIGCTNGTL----KIRDN 532

Query: 246 GNKKDSGTDEEEDGKMARLLHEEEFW 169
            ++K+S T+E ED KMARLL EEEFW
Sbjct: 533 EDQKNSVTEEGEDKKMARLLQEEEFW 558


>emb|CBI27718.3| unnamed protein product [Vitis vinifera]
          Length = 1429

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = -2

Query: 426 YIYNHLVGLDKTSKETDQLFLELPVLVALRDESNKHGDPSLRRVPSKNGTLTINPKIRDN 247
           +IYN L+GL+ TS ++DQ+F ELPVLVALRDE  K GD    +  S  G+     +IRD 
Sbjct: 203 FIYNQLIGLEATSNQSDQIFAELPVLVALRDEGCKRGDFMKAKGGSSGGSSMSGLRIRDI 262

Query: 246 GNKKDSGTDEEEDGKMARLLHEEEFW 169
           GN+ D   +E +D K+ARLL EEE+W
Sbjct: 263 GNEADESFEENDDVKLARLLQEEEYW 288


>ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
           vinifera]
          Length = 1549

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = -2

Query: 426 YIYNHLVGLDKTSKETDQLFLELPVLVALRDESNKHGDPSLRRVPSKNGTLTINPKIRDN 247
           +IYN L+GL+ TS ++DQ+F ELPVLVALRDE  K GD    +  S  G+     +IRD 
Sbjct: 259 FIYNQLIGLEATSNQSDQIFAELPVLVALRDEGCKRGDFMKAKGGSSGGSSMSGLRIRDI 318

Query: 246 GNKKDSGTDEEEDGKMARLLHEEEFW 169
           GN+ D   +E +D K+ARLL EEE+W
Sbjct: 319 GNEADESFEENDDVKLARLLQEEEYW 344


>ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
           gi|222848310|gb|EEE85857.1| DNA methyltransferase
           [Populus trichocarpa]
          Length = 1529

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
 Frame = -2

Query: 426 YIYNHLVGLDKTSKETDQLFLELPVLVALRDESNKHGDPSLRRVPSKNGTLTINPK---- 259
           +IY  + GLD+TSK+ D+ F +LP LVALRDES  HG   L +  +  G L I+PK    
Sbjct: 236 FIYQQITGLDQTSKKNDKFFSDLPALVALRDESRNHGSVLLAKAANPGGNLVIDPKSVDG 295

Query: 258 -IRDNGNKKDSGTDEEEDGKMARLLHEEEFWN 166
            I +  N+  +  +E+ED K+ARLL EEE+W+
Sbjct: 296 AIVNQSNQSSTIAEEDEDAKLARLLQEEEYWH 327


Top