BLASTX nr result

ID: Bupleurum21_contig00026020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026020
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TA...   182   2e-44
ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase...   170   1e-40
ref|XP_002467941.1| hypothetical protein SORBIDRAFT_01g036850 [S...   170   1e-40
ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group] g...   170   1e-40
emb|CBI40096.3| unnamed protein product [Vitis vinifera]              169   3e-40

>ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis] gi|223529101|gb|EEF31082.1| tRNA-specific
           adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score =  182 bits (463), Expect = 2e-44
 Identities = 86/133 (64%), Positives = 105/133 (78%)
 Frame = +1

Query: 22  CVIIEDEKVIASGXXXXXXXXXXXXXXXMEAIDILLEEWQIIGLSKADIAKRFSKCTLYV 201
           CVI+ED KVIASG               MEAID+LLE+WQ  GLS +++A++FSKC LYV
Sbjct: 67  CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKGGLSVSEVAEKFSKCVLYV 126

Query: 202 TCEPCIMCAAALSIIGIKEVYYGCANDKFGGCGSVLALHTSQSEQSTRDEVSKGRGFRCT 381
           TCEPCIMCAAALSI+GI+EVYYGCANDKFGGCGS+L LH+S ++  T   V++G+GF+CT
Sbjct: 127 TCEPCIMCAAALSILGIEEVYYGCANDKFGGCGSILPLHSSSTQSLTSGVVAQGKGFKCT 186

Query: 382 GGIMASEAISLFR 420
           GGIMASEA+SL R
Sbjct: 187 GGIMASEAVSLLR 199


>ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Cucumis
           sativus]
          Length = 191

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/133 (63%), Positives = 96/133 (72%)
 Frame = +1

Query: 22  CVIIEDEKVIASGXXXXXXXXXXXXXXXMEAIDILLEEWQIIGLSKADIAKRFSKCTLYV 201
           CVI+ED  VIA+G               MEAIDIL+E WQ  GLS +++A +FSKC LYV
Sbjct: 36  CVIVEDGMVIATGRNRTTETRNATRHAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYV 95

Query: 202 TCEPCIMCAAALSIIGIKEVYYGCANDKFGGCGSVLALHTSQSEQSTRDEVSKGRGFRCT 381
           TCEPCIMCA+ALSIIGIKEVYYGCANDKFGGCGS+L+LH    E  T      GRGF+CT
Sbjct: 96  TCEPCIMCASALSIIGIKEVYYGCANDKFGGCGSILSLHLGSGEAPTSGN-GLGRGFKCT 154

Query: 382 GGIMASEAISLFR 420
            GIMASEA+ LFR
Sbjct: 155 AGIMASEAVGLFR 167


>ref|XP_002467941.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor]
           gi|241921795|gb|EER94939.1| hypothetical protein
           SORBIDRAFT_01g036850 [Sorghum bicolor]
          Length = 183

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/136 (58%), Positives = 101/136 (74%), Gaps = 3/136 (2%)
 Frame = +1

Query: 22  CVIIEDEKVIASGXXXXXXXXXXXXXXXMEAIDILLEEWQIIGLSKADIAKRFSKCTLYV 201
           CVI+ED KVI+SG               MEAID+LL EWQ +GL +  +A++F+ C LYV
Sbjct: 26  CVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLREWQSMGLDQTQVAEKFAGCDLYV 85

Query: 202 TCEPCIMCAAALSIIGIKEVYYGCANDKFGGCGSVLALH---TSQSEQSTRDEVSKGRGF 372
           TCEPCIMCA ALSIIGI+EVY+GCANDKFGGCGS+++LH   TS S+  +  + SK +GF
Sbjct: 86  TCEPCIMCATALSIIGIREVYFGCANDKFGGCGSIMSLHKGDTSSSDDLSGSQASKPKGF 145

Query: 373 RCTGGIMASEAISLFR 420
           +CTGGIMA EA++LFR
Sbjct: 146 KCTGGIMAEEAVALFR 161


>ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group]
           gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate
           deaminase zinc-binding region family protein, expressed
           [Oryza sativa Japonica Group]
           gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa
           Japonica Group] gi|218192723|gb|EEC75150.1| hypothetical
           protein OsI_11352 [Oryza sativa Indica Group]
          Length = 183

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/133 (57%), Positives = 101/133 (75%)
 Frame = +1

Query: 22  CVIIEDEKVIASGXXXXXXXXXXXXXXXMEAIDILLEEWQIIGLSKADIAKRFSKCTLYV 201
           CVI+ED KVI+SG               MEAIDILL EWQ +GL +  +A++F++C LYV
Sbjct: 29  CVIVEDGKVISSGSNKTNATRNATRHAEMEAIDILLREWQGMGLDQPQVAEKFARCDLYV 88

Query: 202 TCEPCIMCAAALSIIGIKEVYYGCANDKFGGCGSVLALHTSQSEQSTRDEVSKGRGFRCT 381
           TCEPCIMCA ALSI+GI+EVY+GCANDKFGGCGS+++LH S S + + +E+   +G++CT
Sbjct: 89  TCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLHQSSSAELSGEEIPGPKGYKCT 148

Query: 382 GGIMASEAISLFR 420
           GGIMA EA++LFR
Sbjct: 149 GGIMAEEAVALFR 161


>emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/133 (61%), Positives = 102/133 (76%)
 Frame = +1

Query: 22  CVIIEDEKVIASGXXXXXXXXXXXXXXXMEAIDILLEEWQIIGLSKADIAKRFSKCTLYV 201
           CVI+ED K+IA+G               MEAID+LLE+WQ  GLSK ++A+ FSKC+LYV
Sbjct: 51  CVIVEDGKLIATGRNRTTETRNATRHAEMEAIDVLLEQWQKNGLSKLEVAEIFSKCSLYV 110

Query: 202 TCEPCIMCAAALSIIGIKEVYYGCANDKFGGCGSVLALHTSQSEQSTRDEVSKGRGFRCT 381
           TCEPCIMCAA+LSI+GIKEVYYGCANDKFGGCGS+L+LH+S S+  T       +GF+CT
Sbjct: 111 TCEPCIMCAASLSILGIKEVYYGCANDKFGGCGSILSLHSSSSKLLT-SGTPLVKGFKCT 169

Query: 382 GGIMASEAISLFR 420
           GGIMA+EA+SL +
Sbjct: 170 GGIMATEAVSLLQ 182


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