BLASTX nr result

ID: Bupleurum21_contig00026013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026013
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|1...   146   4e-33
ref|XP_002523906.1| RNA-binding region-containing protein, putat...   144   3e-32
ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|2...   142   6e-32
emb|CBI31519.3| unnamed protein product [Vitis vinifera]              139   9e-31
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...   135   1e-29

>ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1|
           unknown [Populus trichocarpa]
           gi|222864314|gb|EEF01445.1| predicted protein [Populus
           trichocarpa]
          Length = 253

 Score =  146 bits (369), Expect = 4e-33
 Identities = 87/164 (53%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
 Frame = +1

Query: 46  PAQHGPANNVGPRSVATLPASNHVQWYYPPVATATTQQAVSPYLHPXXXXXXXXXXXXMP 225
           P Q GP  N GPRS    PA NHVQWYYP  + A    A SP+ H             +P
Sbjct: 106 PPQQGPNINAGPRSTPAAPA-NHVQWYYPAGSAA----AASPFHHQHHQA--------VP 152

Query: 226 YYGYSPAYIAADHVNDNHKLGYTEGGSYMNGQYSQVYLGQPMMGANTVMPMYPLYHFLHQ 405
           +YGYSPAYIA D  + NHKL YT GGSYMNG +SQVY GQ M+GANT+MPMYP YHF HQ
Sbjct: 153 FYGYSPAYIATD-TSGNHKLNYT-GGSYMNGHFSQVYPGQAMVGANTLMPMYPFYHF-HQ 209

Query: 406 SHTMGLP-AHYYSXXXXXXXXXXXXFMSKPTSI-PPNPVYLTAE 531
           S  MGLP AH +              MSKP SI PP+ V L  E
Sbjct: 210 SQAMGLPAAHIFPPTTAGPMTTVPTIMSKPPSIAPPSAVCLAVE 253


>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  144 bits (362), Expect = 3e-32
 Identities = 83/162 (51%), Positives = 97/162 (59%)
 Frame = +1

Query: 46  PAQHGPANNVGPRSVATLPASNHVQWYYPPVATATTQQAVSPYLHPXXXXXXXXXXXXMP 225
           P Q G  +N G R  +  PA NHVQWYYP  + A      SPY H             +P
Sbjct: 114 PPQQG--SNHGQRPSSAAPA-NHVQWYYPAGSPA------SPYHH-------HHHHQAVP 157

Query: 226 YYGYSPAYIAADHVNDNHKLGYTEGGSYMNGQYSQVYLGQPMMGANTVMPMYPLYHFLHQ 405
           +YGY+P Y+A D ++ NHKL YT GGSYMNG +SQVY GQ +MGANT+MPMYPLYHF HQ
Sbjct: 158 FYGYTPTYVATD-ISYNHKLSYT-GGSYMNGHFSQVYPGQAIMGANTLMPMYPLYHF-HQ 214

Query: 406 SHTMGLPAHYYSXXXXXXXXXXXXFMSKPTSIPPNPVYLTAE 531
           S TMGLPAH +              MSKP SI P+PV L  E
Sbjct: 215 SQTMGLPAHIFPQTTAGPITTVPTIMSKPPSIAPSPVCLAVE 256


>ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  142 bits (359), Expect = 6e-32
 Identities = 86/164 (52%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
 Frame = +1

Query: 46  PAQHGPANNVGPRSVATLPASNHVQWYYPPVATATTQQAVSPYLHPXXXXXXXXXXXXMP 225
           P Q GP    GPRS    PA NHVQWYYP  + A      SP+ H             +P
Sbjct: 105 PPQQGPNIIAGPRSTPAPPA-NHVQWYYPAGSAAA-----SPFHHQHHQA--------VP 150

Query: 226 YYGYSPAYIAADHVNDNHKLGYTEGGSYMNGQYSQVYLGQPMMGANTVMPMYPLYHFLHQ 405
           +YGYSPAYIA D ++ NHKL YT GGSYMNG +SQVY GQ M+GANT+MPMYPLYHF HQ
Sbjct: 151 FYGYSPAYIATD-ISYNHKLSYT-GGSYMNGHFSQVYPGQAMVGANTLMPMYPLYHF-HQ 207

Query: 406 SHTMGLP-AHYYSXXXXXXXXXXXXFMSKPTSI-PPNPVYLTAE 531
           S  +GLP AH +              MSKP SI PPN V L  E
Sbjct: 208 SQAVGLPAAHIFPPNTAGPMTTVPTIMSKPPSIAPPNAVCLAVE 251


>emb|CBI31519.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  139 bits (349), Expect = 9e-31
 Identities = 85/177 (48%), Positives = 98/177 (55%)
 Frame = +1

Query: 1   SLGAXXXXXXXXXTTPAQHGPANNVGPRSVATLPASNHVQWYYPPVATATTQQAVSPYLH 180
           SLGA         T P Q    +N G R  +  PAS HVQWYYP    A       P+ H
Sbjct: 61  SLGARRPRSAASSTPPHQ---GSNGGSRPTSAAPAS-HVQWYYPAGTPAP------PFHH 110

Query: 181 PXXXXXXXXXXXXMPYYGYSPAYIAADHVNDNHKLGYTEGGSYMNGQYSQVYLGQPMMGA 360
                        +P+YGYSPAYIAAD ++ NHKL YT GGSYMNG +SQVY GQ M+GA
Sbjct: 111 QHHQA--------VPFYGYSPAYIAAD-ISYNHKLSYT-GGSYMNGHFSQVYPGQAMVGA 160

Query: 361 NTVMPMYPLYHFLHQSHTMGLPAHYYSXXXXXXXXXXXXFMSKPTSIPPNPVYLTAE 531
           N +MPMYP YHF HQS TMG PAH +              +SKPTS+ PN V L  E
Sbjct: 161 NALMPMYPFYHF-HQSQTMGHPAHMFPPTTVGPMPTVPAIISKPTSMAPNTVCLAVE 216


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score =  135 bits (339), Expect = 1e-29
 Identities = 82/170 (48%), Positives = 95/170 (55%)
 Frame = +1

Query: 1   SLGAXXXXXXXXXTTPAQHGPANNVGPRSVATLPASNHVQWYYPPVATATTQQAVSPYLH 180
           SLGA         T P Q    +N G R  +  PAS HVQWYYP    A       P+ H
Sbjct: 92  SLGARRPRSAASSTPPHQ---GSNGGSRPTSAAPAS-HVQWYYPAGTPAP------PFHH 141

Query: 181 PXXXXXXXXXXXXMPYYGYSPAYIAADHVNDNHKLGYTEGGSYMNGQYSQVYLGQPMMGA 360
                        +P+YGYSPAYIAAD ++ NHKL YT GGSYMNG +SQVY GQ M+GA
Sbjct: 142 QHHQA--------VPFYGYSPAYIAAD-ISYNHKLSYT-GGSYMNGHFSQVYPGQAMVGA 191

Query: 361 NTVMPMYPLYHFLHQSHTMGLPAHYYSXXXXXXXXXXXXFMSKPTSIPPN 510
           N +MPMYP YHF HQS TMG PAH +              +SKPTS+ PN
Sbjct: 192 NALMPMYPFYHF-HQSQTMGHPAHMFPPTTVGPMPTVPAIISKPTSMAPN 240


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