BLASTX nr result
ID: Bupleurum21_contig00025990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00025990
(508 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAH56931.1| AT1G79050 [Arabidopsis thaliana] 115 4e-34
ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis tha... 115 4e-34
gb|AAA32855.1| replicase, partial [Arabidopsis thaliana] 115 4e-34
ref|NP_001077844.1| DNA repair protein recA-like 1 [Arabidopsis ... 115 4e-34
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1... 114 1e-33
>dbj|BAH56931.1| AT1G79050 [Arabidopsis thaliana]
Length = 448
Score = 115 bits (288), Expect(3) = 4e-34
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +3
Query: 192 KIYGQESSDTTTLALHAVAEVQRSGGNAMLVDAEHAFDPT*SKGLGVDVENLIVCQPDDG 371
+IYG ESS TTLALHA+AEVQ+ GGNAMLVDAEHAFDP SK LGVDVENLIVCQPD+G
Sbjct: 139 EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNG 198
Query: 372 EMALERGDRSAANG 413
EMALE DR +G
Sbjct: 199 EMALETADRMCRSG 212
Score = 38.9 bits (89), Expect(3) = 4e-34
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 452 KITGNASKAGCTLIFLNQI 508
K++GNASKAGCTLIFLNQI
Sbjct: 253 KMSGNASKAGCTLIFLNQI 271
Score = 35.8 bits (81), Expect(3) = 4e-34
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 388 GEIGVQQMGLQARLMSHQALRQ 453
GEIG+QQMGLQARLMS QALR+
Sbjct: 233 GEIGMQQMGLQARLMS-QALRK 253
>ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
gi|2500098|sp|Q39199.1|RECAC_ARATH RecName: Full=DNA
repair protein recA homolog 1, chloroplastic; AltName:
Full=Recombinase A homolog 1; Flags: Precursor
gi|289208|gb|AAA61781.1| chloroplast DNA repair protein
precursor [Arabidopsis thaliana]
gi|3152570|gb|AAC17051.1| Match to nuclear-encoded
chloroplast DNA repair protein (E. coli recA homolog)
gb|L15229 [Arabidopsis thaliana]
gi|15292903|gb|AAK92822.1| putative replicase
[Arabidopsis thaliana] gi|21281181|gb|AAM45008.1|
putative replicase [Arabidopsis thaliana]
gi|332198076|gb|AEE36197.1| DNA repair protein recA-like
1 [Arabidopsis thaliana]
Length = 439
Score = 115 bits (288), Expect(3) = 4e-34
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +3
Query: 192 KIYGQESSDTTTLALHAVAEVQRSGGNAMLVDAEHAFDPT*SKGLGVDVENLIVCQPDDG 371
+IYG ESS TTLALHA+AEVQ+ GGNAMLVDAEHAFDP SK LGVDVENLIVCQPD+G
Sbjct: 139 EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNG 198
Query: 372 EMALERGDRSAANG 413
EMALE DR +G
Sbjct: 199 EMALETADRMCRSG 212
Score = 38.9 bits (89), Expect(3) = 4e-34
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 452 KITGNASKAGCTLIFLNQI 508
K++GNASKAGCTLIFLNQI
Sbjct: 253 KMSGNASKAGCTLIFLNQI 271
Score = 35.8 bits (81), Expect(3) = 4e-34
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 388 GEIGVQQMGLQARLMSHQALRQ 453
GEIG+QQMGLQARLMS QALR+
Sbjct: 233 GEIGMQQMGLQARLMS-QALRK 253
>gb|AAA32855.1| replicase, partial [Arabidopsis thaliana]
Length = 438
Score = 115 bits (288), Expect(3) = 4e-34
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +3
Query: 192 KIYGQESSDTTTLALHAVAEVQRSGGNAMLVDAEHAFDPT*SKGLGVDVENLIVCQPDDG 371
+IYG ESS TTLALHA+AEVQ+ GGNAMLVDAEHAFDP SK LGVDVENLIVCQPD+G
Sbjct: 138 EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNG 197
Query: 372 EMALERGDRSAANG 413
EMALE DR +G
Sbjct: 198 EMALETADRMCRSG 211
Score = 38.9 bits (89), Expect(3) = 4e-34
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 452 KITGNASKAGCTLIFLNQI 508
K++GNASKAGCTLIFLNQI
Sbjct: 252 KMSGNASKAGCTLIFLNQI 270
Score = 35.8 bits (81), Expect(3) = 4e-34
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 388 GEIGVQQMGLQARLMSHQALRQ 453
GEIG+QQMGLQARLMS QALR+
Sbjct: 232 GEIGMQQMGLQARLMS-QALRK 252
>ref|NP_001077844.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
gi|332198077|gb|AEE36198.1| DNA repair protein recA-like
1 [Arabidopsis thaliana]
Length = 343
Score = 115 bits (288), Expect(3) = 4e-34
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +3
Query: 192 KIYGQESSDTTTLALHAVAEVQRSGGNAMLVDAEHAFDPT*SKGLGVDVENLIVCQPDDG 371
+IYG ESS TTLALHA+AEVQ+ GGNAMLVDAEHAFDP SK LGVDVENLIVCQPD+G
Sbjct: 139 EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNG 198
Query: 372 EMALERGDRSAANG 413
EMALE DR +G
Sbjct: 199 EMALETADRMCRSG 212
Score = 38.9 bits (89), Expect(3) = 4e-34
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 452 KITGNASKAGCTLIFLNQI 508
K++GNASKAGCTLIFLNQI
Sbjct: 253 KMSGNASKAGCTLIFLNQI 271
Score = 35.8 bits (81), Expect(3) = 4e-34
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 388 GEIGVQQMGLQARLMSHQALRQ 453
GEIG+QQMGLQARLMS QALR+
Sbjct: 233 GEIGMQQMGLQARLMS-QALRK 253
>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Vitis vinifera]
Length = 415
Score = 114 bits (284), Expect(3) = 1e-33
Identities = 57/74 (77%), Positives = 61/74 (82%)
Frame = +3
Query: 192 KIYGQESSDTTTLALHAVAEVQRSGGNAMLVDAEHAFDPT*SKGLGVDVENLIVCQPDDG 371
+IYG ESS TTLALHA+AEVQ+ GGNAMLVDAEHAFDP SK LGVDVENLIVCQPD G
Sbjct: 120 EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHG 179
Query: 372 EMALERGDRSAANG 413
EMALE DR +G
Sbjct: 180 EMALEIADRMCRSG 193
Score = 38.9 bits (89), Expect(3) = 1e-33
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 452 KITGNASKAGCTLIFLNQI 508
K++GNASKAGCTLIFLNQI
Sbjct: 234 KMSGNASKAGCTLIFLNQI 252
Score = 35.8 bits (81), Expect(3) = 1e-33
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 388 GEIGVQQMGLQARLMSHQALRQ 453
GEIG+QQMGLQARLMS QALR+
Sbjct: 214 GEIGMQQMGLQARLMS-QALRK 234