BLASTX nr result

ID: Bupleurum21_contig00025972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025972
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524536.1| conserved hypothetical protein [Ricinus comm...   128   4e-28
ref|XP_002331801.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_004146086.1| PREDICTED: transcription factor TGA5-like [C...   110   9e-23
ref|XP_002283108.1| PREDICTED: uncharacterized protein LOC100245...   110   2e-22
ref|XP_003634664.1| PREDICTED: uncharacterized protein LOC100854...   109   2e-22

>ref|XP_002524536.1| conserved hypothetical protein [Ricinus communis]
           gi|223536210|gb|EEF37863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/106 (54%), Positives = 75/106 (70%)
 Frame = +1

Query: 22  FQRFHERWHQQLHQHIQNLKKAPRPPTSEDQNTHLFNLVRTFLSHLTDYYRVKSVVAQQD 201
           F RF+E W  QLH+    L KAP+PPTSE   +HL NLV   + H  +YYRVKS   ++D
Sbjct: 4   FCRFYETWFDQLHRLFHQLSKAPKPPTSEYDASHLSNLVDKLMDHYVEYYRVKSEAVERD 63

Query: 202 VLFLLDAPWATSFERSLHWLAGWRPTTAFQVLHTESTILFENRMLD 339
           VL +  A W +S ERSLHW+AGWRPTT F +++TES+ILFE R++D
Sbjct: 64  VLAVFTAHWTSSLERSLHWIAGWRPTTLFHLVYTESSILFEPRIVD 109


>ref|XP_002331801.1| predicted protein [Populus trichocarpa] gi|222874497|gb|EEF11628.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  128 bits (322), Expect = 4e-28
 Identities = 54/106 (50%), Positives = 79/106 (74%)
 Frame = +1

Query: 22  FQRFHERWHQQLHQHIQNLKKAPRPPTSEDQNTHLFNLVRTFLSHLTDYYRVKSVVAQQD 201
           F RF++ W  QL+Q ++ L+ AP+PP+S+D  +HL +L +  +SH  ++YRVKS+  + D
Sbjct: 7   FTRFYDTWFDQLNQLLEQLRTAPKPPSSQDDRSHLSSLAQKIVSHYAEFYRVKSMAIESD 66

Query: 202 VLFLLDAPWATSFERSLHWLAGWRPTTAFQVLHTESTILFENRMLD 339
           VL +  APWA+ FERSLHW+AGWRPTT F +++TES+ILFE  + D
Sbjct: 67  VLSVFTAPWASCFERSLHWIAGWRPTTLFHLVYTESSILFEFHIAD 112


>ref|XP_004146086.1| PREDICTED: transcription factor TGA5-like [Cucumis sativus]
           gi|449533979|ref|XP_004173947.1| PREDICTED:
           transcription factor TGA5-like [Cucumis sativus]
          Length = 232

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/106 (47%), Positives = 73/106 (68%)
 Frame = +1

Query: 22  FQRFHERWHQQLHQHIQNLKKAPRPPTSEDQNTHLFNLVRTFLSHLTDYYRVKSVVAQQD 201
           F  F+  W   LH+ +  L    +   + + ++   +LV+T +SH +DYYRVKS+ A++D
Sbjct: 8   FTSFYATWFDHLHRLVDQLSSTAKD--NHNSSSAPDHLVQTVMSHYSDYYRVKSMAAERD 65

Query: 202 VLFLLDAPWATSFERSLHWLAGWRPTTAFQVLHTESTILFENRMLD 339
            L +  APWATS ERSLHW+AGWRPTT F +++TES+ILFE+R+ D
Sbjct: 66  PLSVFSAPWATSLERSLHWIAGWRPTTTFHLIYTESSILFESRIFD 111


>ref|XP_002283108.1| PREDICTED: uncharacterized protein LOC100245234 [Vitis vinifera]
          Length = 227

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/108 (46%), Positives = 69/108 (63%)
 Frame = +1

Query: 16  MGFQRFHERWHQQLHQHIQNLKKAPRPPTSEDQNTHLFNLVRTFLSHLTDYYRVKSVVAQ 195
           M F RF+  W   L+  +  L  AP+P T +D N  L  LV+  +SH + YYR KSV AQ
Sbjct: 1   MSFHRFYASWFDHLNHLVHQLTLAPKPTTPQD-NPALLQLVQKVISHYSQYYRAKSVAAQ 59

Query: 196 QDVLFLLDAPWATSFERSLHWLAGWRPTTAFQVLHTESTILFENRMLD 339
            D + L  APW++S ERSLHW+AGWRPT  F +++TE++  FE+ + D
Sbjct: 60  NDAVSLFAAPWSSSLERSLHWVAGWRPTIVFHLIYTETSARFESHIAD 107


>ref|XP_003634664.1| PREDICTED: uncharacterized protein LOC100854900 [Vitis vinifera]
          Length = 231

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/108 (46%), Positives = 72/108 (66%)
 Frame = +1

Query: 16  MGFQRFHERWHQQLHQHIQNLKKAPRPPTSEDQNTHLFNLVRTFLSHLTDYYRVKSVVAQ 195
           M F+ F+E W   LH  +Q L+ AP+  T+ D++  L +LV    +H + YYR  S  A+
Sbjct: 1   MSFESFNEAWFDHLHDLLQQLRLAPKA-TAPDRDRALLDLVHKVRTHYSQYYRAMSYTAR 59

Query: 196 QDVLFLLDAPWATSFERSLHWLAGWRPTTAFQVLHTESTILFENRMLD 339
            DV+ L  APW++S ERSLHW+AGWRPT AF +++T S+ILFE  ++D
Sbjct: 60  HDVVSLFAAPWSSSLERSLHWVAGWRPTIAFHLIYTHSSILFETHIVD 107


Top