BLASTX nr result

ID: Bupleurum21_contig00025864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025864
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513789.1| Transmembrane emp24 domain-containing protei...   113   3e-33
ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-contai...   110   5e-32
emb|CBI23839.3| unnamed protein product [Vitis vinifera]              110   5e-32
ref|XP_004149958.1| PREDICTED: transmembrane emp24 domain-contai...   110   2e-31
emb|CAN82472.1| hypothetical protein VITISV_039788 [Vitis vinifera]   108   2e-31

>ref|XP_002513789.1| Transmembrane emp24 domain-containing protein 10 precursor,
           putative [Ricinus communis] gi|223546875|gb|EEF48372.1|
           Transmembrane emp24 domain-containing protein 10
           precursor, putative [Ricinus communis]
          Length = 219

 Score =  113 bits (282), Expect(2) = 3e-33
 Identities = 58/89 (65%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = -2

Query: 265 THGQFAFTTTEAGNYFACFWLDENHKADTGVT-VSLDWRIGIAAKDWESVARXXXXXXXX 89
           THGQFAFTT+EAGNY ACFWLD NH+   G T +SLDWRIGIAAKDW+SVAR        
Sbjct: 91  THGQFAFTTSEAGNYLACFWLD-NHQQQAGTTTMSLDWRIGIAAKDWDSVARKEKIEGVE 149

Query: 88  XXXXXXXGAIETIHQNLIYLKSREAEMRE 2
                  GA++ IH NLIYLK REAEMRE
Sbjct: 150 LDLTRLEGAVQAIHTNLIYLKEREAEMRE 178



 Score = 54.3 bits (129), Expect(2) = 3e-33
 Identities = 26/50 (52%), Positives = 35/50 (70%)
 Frame = -3

Query: 492 MQCFVMILLYIVTNHAGAIWIEIPSSGTKCVSEDIKQNVVVIADFSLITD 343
           +  FV+   + V   A AIW  IPSSGTKCVSE+I+ NVVV+AD+ +I +
Sbjct: 14  LSLFVLCSSFDVIPVAEAIWFTIPSSGTKCVSEEIQNNVVVLADYYIINE 63


>ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-containing protein 10-like
           [Vitis vinifera]
          Length = 216

 Score =  110 bits (274), Expect(2) = 5e-32
 Identities = 52/87 (59%), Positives = 63/87 (72%)
 Frame = -2

Query: 265 THGQFAFTTTEAGNYFACFWLDENHKADTGVTVSLDWRIGIAAKDWESVARXXXXXXXXX 86
           THGQFAFTT+EAGNY ACFW+D +++    V+V+LDW+ GI AKDWESVAR         
Sbjct: 88  THGQFAFTTSEAGNYLACFWVDGHNQGGGDVSVNLDWKTGIGAKDWESVARKEKIEGVEL 147

Query: 85  XXXXXXGAIETIHQNLIYLKSREAEMR 5
                 GA+E IH+NL+YLKSREAEMR
Sbjct: 148 ELRKLEGAVEAIHENLLYLKSREAEMR 174



 Score = 53.1 bits (126), Expect(2) = 5e-32
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 441 AIWIEIPSSGTKCVSEDIKQNVVVIADFSLITD 343
           AIW+ IPSSGTKCVSE+I+ NVVV+AD+ +I D
Sbjct: 28  AIWLSIPSSGTKCVSEEIQNNVVVLADYLVIPD 60


>emb|CBI23839.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  110 bits (274), Expect(2) = 5e-32
 Identities = 52/87 (59%), Positives = 63/87 (72%)
 Frame = -2

Query: 265 THGQFAFTTTEAGNYFACFWLDENHKADTGVTVSLDWRIGIAAKDWESVARXXXXXXXXX 86
           THGQFAFTT+EAGNY ACFW+D +++    V+V+LDW+ GI AKDWESVAR         
Sbjct: 64  THGQFAFTTSEAGNYLACFWVDGHNQGGGDVSVNLDWKTGIGAKDWESVARKEKIEGVEL 123

Query: 85  XXXXXXGAIETIHQNLIYLKSREAEMR 5
                 GA+E IH+NL+YLKSREAEMR
Sbjct: 124 ELRKLEGAVEAIHENLLYLKSREAEMR 150



 Score = 53.1 bits (126), Expect(2) = 5e-32
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 441 AIWIEIPSSGTKCVSEDIKQNVVVIADFSLITD 343
           AIW+ IPSSGTKCVSE+I+ NVVV+AD+ +I D
Sbjct: 4   AIWLSIPSSGTKCVSEEIQNNVVVLADYLVIPD 36


>ref|XP_004149958.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24delta3-like [Cucumis sativus]
           gi|449497650|ref|XP_004160461.1| PREDICTED:
           transmembrane emp24 domain-containing protein
           p24delta3-like [Cucumis sativus]
          Length = 212

 Score =  110 bits (274), Expect(2) = 2e-31
 Identities = 53/88 (60%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = -2

Query: 265 THGQFAFTTTEAGNYFACFWL-DENHKADTGVTVSLDWRIGIAAKDWESVARXXXXXXXX 89
           THGQFAFTTTEAGNY  CFWL D  H+A   ++V+LDWR GIAAKDWESVA+        
Sbjct: 83  THGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDWRTGIAAKDWESVAKKEKIEGVE 142

Query: 88  XXXXXXXGAIETIHQNLIYLKSREAEMR 5
                  GA+E IH+NL+YLK REA+MR
Sbjct: 143 LELRKLEGAVEAIHENLLYLKDREADMR 170



 Score = 51.2 bits (121), Expect(2) = 2e-31
 Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -3

Query: 504 WSVSMQCFVMILLYI-VTNHAGAIWIEIPSSGTKCVSEDIKQNVVVIADFSLITD 343
           W V +  F++      +   A +IW+ +P SGTKCVSE+I+ NVVV+AD+ ++ D
Sbjct: 3   WEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD 57


>emb|CAN82472.1| hypothetical protein VITISV_039788 [Vitis vinifera]
          Length = 207

 Score =  108 bits (269), Expect(2) = 2e-31
 Identities = 51/87 (58%), Positives = 63/87 (72%)
 Frame = -2

Query: 265 THGQFAFTTTEAGNYFACFWLDENHKADTGVTVSLDWRIGIAAKDWESVARXXXXXXXXX 86
           THGQFAFTT+EAGNY ACFW++ +++    V+V+LDW+ GI AKDWESVAR         
Sbjct: 79  THGQFAFTTSEAGNYLACFWVNGHNQGGGDVSVNLDWKTGIGAKDWESVARKEKIEGVEL 138

Query: 85  XXXXXXGAIETIHQNLIYLKSREAEMR 5
                 GA+E IH+NL+YLKSREAEMR
Sbjct: 139 ELRKLEGAVEAIHENLLYLKSREAEMR 165



 Score = 53.1 bits (126), Expect(2) = 2e-31
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 441 AIWIEIPSSGTKCVSEDIKQNVVVIADFSLITD 343
           AIW+ IPSSGTKCVSE+I+ NVVV+AD+ +I D
Sbjct: 19  AIWLSIPSSGTKCVSEEIQNNVVVLADYLVIPD 51


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