BLASTX nr result

ID: Bupleurum21_contig00025593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025593
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595274.1| Zinc finger CCHC domain-containing protein, ...    66   2e-19
ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. ...    64   9e-19
dbj|BAD43804.1| unknown protein [Arabidopsis thaliana] gi|110739...    64   9e-19
ref|NP_193654.2| uncharacterized zinc finger CCHC domain-contain...    64   9e-19
ref|XP_002270679.1| PREDICTED: uncharacterized zinc finger CCHC ...    60   8e-18

>ref|XP_003595274.1| Zinc finger CCHC domain-containing protein, putative [Medicago
           truncatula] gi|355484322|gb|AES65525.1| Zinc finger CCHC
           domain-containing protein, putative [Medicago
           truncatula]
          Length = 909

 Score = 66.2 bits (160), Expect(2) = 2e-19
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 119 TKSGTAWSHNFLNQKPWHPLSYPNQRR 199
           TKSGTAWSHNFLNQKPWHPLSYPNQRR
Sbjct: 28  TKSGTAWSHNFLNQKPWHPLSYPNQRR 54



 Score = 54.3 bits (129), Expect(2) = 2e-19
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 204 RKWIAEQTHAQRDRRADEVAREYAQEQ 284
           RKWIAEQTHAQR+RR +EVAREYAQEQ
Sbjct: 54  RKWIAEQTHAQRERRTEEVAREYAQEQ 80


>ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315832|gb|EFH46255.1| putative protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1251

 Score = 64.3 bits (155), Expect(2) = 9e-19
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 119 TKSGTAWSHNFLNQKPWHPLSYPNQRR 199
           TKSGTAWSH+FLNQKPWHPLSYPNQRR
Sbjct: 32  TKSGTAWSHSFLNQKPWHPLSYPNQRR 58



 Score = 53.9 bits (128), Expect(2) = 9e-19
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 204 RKWIAEQTHAQRDRRADEVAREYAQEQ 284
           RKWIAEQTHAQ DRRA+EVARE+AQEQ
Sbjct: 58  RKWIAEQTHAQHDRRAEEVAREFAQEQ 84


>dbj|BAD43804.1| unknown protein [Arabidopsis thaliana] gi|110739716|dbj|BAF01765.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 595

 Score = 64.3 bits (155), Expect(2) = 9e-19
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 119 TKSGTAWSHNFLNQKPWHPLSYPNQRR 199
           TKSGTAWSH+FLNQKPWHPLSYPNQRR
Sbjct: 32  TKSGTAWSHSFLNQKPWHPLSYPNQRR 58



 Score = 53.9 bits (128), Expect(2) = 9e-19
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 204 RKWIAEQTHAQRDRRADEVAREYAQEQ 284
           RKWIAEQTHAQ DRRA+EVARE+AQEQ
Sbjct: 58  RKWIAEQTHAQHDRRAEEVAREFAQEQ 84


>ref|NP_193654.2| uncharacterized zinc finger CCHC domain-containing protein
           [Arabidopsis thaliana]
           gi|75248513|sp|Q8VZ67.1|Y4919_ARATH RecName:
           Full=Uncharacterized zinc finger CCHC domain-containing
           protein At4g19190 gi|17528964|gb|AAL38692.1| putative
           putatative protein [Arabidopsis thaliana]
           gi|22136744|gb|AAM91691.1| putative putatative protein
           [Arabidopsis thaliana] gi|332658757|gb|AEE84157.1|
           uncharacterized zinc finger CCHC domain-containing
           protein [Arabidopsis thaliana]
          Length = 595

 Score = 64.3 bits (155), Expect(2) = 9e-19
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 119 TKSGTAWSHNFLNQKPWHPLSYPNQRR 199
           TKSGTAWSH+FLNQKPWHPLSYPNQRR
Sbjct: 32  TKSGTAWSHSFLNQKPWHPLSYPNQRR 58



 Score = 53.9 bits (128), Expect(2) = 9e-19
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 204 RKWIAEQTHAQRDRRADEVAREYAQEQ 284
           RKWIAEQTHAQ DRRA+EVARE+AQEQ
Sbjct: 58  RKWIAEQTHAQHDRRAEEVAREFAQEQ 84


>ref|XP_002270679.1| PREDICTED: uncharacterized zinc finger CCHC domain-containing
           protein At4g19190 [Vitis vinifera]
           gi|296085457|emb|CBI29189.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score = 60.1 bits (144), Expect(2) = 8e-18
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +2

Query: 122 KSGTAWSHNFLNQKPWHPLSYPNQRR 199
           K+GTAWSH++LNQKPWHPLSYPNQRR
Sbjct: 27  KAGTAWSHSYLNQKPWHPLSYPNQRR 52



 Score = 55.1 bits (131), Expect(2) = 8e-18
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 204 RKWIAEQTHAQRDRRADEVAREYAQEQ 284
           RKWIAEQTHAQRDRRA EVARE+AQEQ
Sbjct: 52  RKWIAEQTHAQRDRRAQEVAREFAQEQ 78


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