BLASTX nr result

ID: Bupleurum21_contig00025500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025500
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   138   2e-30
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              138   2e-30
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   137   4e-30
ref|XP_002515641.1| RNA binding protein, putative [Ricinus commu...   131   4e-28
ref|XP_002538760.1| hypothetical protein RCOM_2139380 [Ricinus c...   125   2e-26

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  138 bits (348), Expect = 2e-30
 Identities = 78/224 (34%), Positives = 131/224 (58%), Gaps = 1/224 (0%)
 Frame = -1

Query: 669  DDQPVLIDKSATSLDGDADVEKSSVVPMKDIIPYSPPPKNVQD-TESAELHTPAVIRRDS 493
            DDQP+ +        G AD  K S  P + +  ++   +   + T+S  +     I  D 
Sbjct: 966  DDQPLKMWFEGMHSPGVADNSKLS--PGQTVNQWNEARERPSEVTQSPRIDPTGEIMLDL 1023

Query: 492  TDNNTDIPFDKCSPLWKCIDSMEIYSKAKRKPHFSPLLEFEQETREGMAIAHIVTFSTLV 313
               N  +PF K SP+W  ++++E++ +  +KPHF PL   ++E REG+AI ++VTFSTL+
Sbjct: 1024 ---NQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLI 1080

Query: 312  EKTSKLQFSDSSSTMESYLQTLANLEKHGFDVDPVRSCLMLLLTNKKSKEKLEEQYKQIR 133
            EK +KL+F D  S   S L+ L  LE HGFD  PV+S +  L+  K  +E+L+ + K++ 
Sbjct: 1081 EKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVE 1140

Query: 132  NEITSNEREKDELDQAILQMNQQIKDLAEKLSVAESRKAKKNEE 1
            N+I  +  EK ++D+ I ++++++ +L EK ++A S K  K+ E
Sbjct: 1141 NQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSE 1184


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  138 bits (348), Expect = 2e-30
 Identities = 78/224 (34%), Positives = 131/224 (58%), Gaps = 1/224 (0%)
 Frame = -1

Query: 669  DDQPVLIDKSATSLDGDADVEKSSVVPMKDIIPYSPPPKNVQD-TESAELHTPAVIRRDS 493
            DDQP+ +        G AD  K S  P + +  ++   +   + T+S  +     I  D 
Sbjct: 826  DDQPLKMWFEGMHSPGVADNSKLS--PGQTVNQWNEARERPSEVTQSPRIDPTGEIMLDL 883

Query: 492  TDNNTDIPFDKCSPLWKCIDSMEIYSKAKRKPHFSPLLEFEQETREGMAIAHIVTFSTLV 313
               N  +PF K SP+W  ++++E++ +  +KPHF PL   ++E REG+AI ++VTFSTL+
Sbjct: 884  ---NQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLI 940

Query: 312  EKTSKLQFSDSSSTMESYLQTLANLEKHGFDVDPVRSCLMLLLTNKKSKEKLEEQYKQIR 133
            EK +KL+F D  S   S L+ L  LE HGFD  PV+S +  L+  K  +E+L+ + K++ 
Sbjct: 941  EKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVE 1000

Query: 132  NEITSNEREKDELDQAILQMNQQIKDLAEKLSVAESRKAKKNEE 1
            N+I  +  EK ++D+ I ++++++ +L EK ++A S K  K+ E
Sbjct: 1001 NQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSE 1044


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  137 bits (346), Expect = 4e-30
 Identities = 65/163 (39%), Positives = 108/163 (66%)
 Frame = -1

Query: 489  DNNTDIPFDKCSPLWKCIDSMEIYSKAKRKPHFSPLLEFEQETREGMAIAHIVTFSTLVE 310
            D N  +PF K SP+W  ++++E++ +  +KPHF PL   ++E REG+AI ++VTFSTL+E
Sbjct: 1004 DLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIE 1063

Query: 309  KTSKLQFSDSSSTMESYLQTLANLEKHGFDVDPVRSCLMLLLTNKKSKEKLEEQYKQIRN 130
            K +KL+F D  S   S L+ L  LE HGFD  PV+S +  L+  K  +E+L+ + K++ N
Sbjct: 1064 KVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVEN 1123

Query: 129  EITSNEREKDELDQAILQMNQQIKDLAEKLSVAESRKAKKNEE 1
            +I  +  EK ++D+ I ++++++ +L EK ++A S K  K+ E
Sbjct: 1124 QIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSE 1166


>ref|XP_002515641.1| RNA binding protein, putative [Ricinus communis]
            gi|223545235|gb|EEF46743.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 683

 Score =  131 bits (329), Expect = 4e-28
 Identities = 70/207 (33%), Positives = 128/207 (61%), Gaps = 2/207 (0%)
 Frame = -1

Query: 615  DVEKSSVVPMKDIIPYSPPPKNVQDTESAELHTPAVIRRDSTD--NNTDIPFDKCSPLWK 442
            + E S+V+ M+ +       +N +  +S+ ++ P     ++T+   N ++PF K S +WK
Sbjct: 454  EAELSTVISMEHLGKRERKVENFK--QSSVINVP-----EATELVENLEMPFFKSSLIWK 506

Query: 441  CIDSMEIYSKAKRKPHFSPLLEFEQETREGMAIAHIVTFSTLVEKTSKLQFSDSSSTMES 262
             I+S+E++    +KPHFSPL+  ++E+REGMA+ H+++F+ L+EK SKLQ  D     +S
Sbjct: 507  NIESLEVFQVLPQKPHFSPLIRHKEESREGMAMGHMLSFAVLIEKMSKLQVDDGREVFDS 566

Query: 261  YLQTLANLEKHGFDVDPVRSCLMLLLTNKKSKEKLEEQYKQIRNEITSNEREKDELDQAI 82
            Y++ LA+LE HGF V+ +  CL  LL+ K   ++LE++ K++   +   + EK +L++ I
Sbjct: 567  YMEVLADLEMHGFQVEAIAECLEKLLSIKDRCKRLEDEAKKVHIGMAEGKHEKIKLEEDI 626

Query: 81   LQMNQQIKDLAEKLSVAESRKAKKNEE 1
             ++ ++I  L E+ ++  S K  K+ E
Sbjct: 627  DKIEKRISLLEEQRAMKVSMKMMKDSE 653


>ref|XP_002538760.1| hypothetical protein RCOM_2139380 [Ricinus communis]
           gi|223510536|gb|EEF23623.1| hypothetical protein
           RCOM_2139380 [Ricinus communis]
          Length = 201

 Score =  125 bits (314), Expect = 2e-26
 Identities = 61/161 (37%), Positives = 104/161 (64%)
 Frame = -1

Query: 483 NTDIPFDKCSPLWKCIDSMEIYSKAKRKPHFSPLLEFEQETREGMAIAHIVTFSTLVEKT 304
           N ++PF K S +WK I+S+E++    +KPHFSPL+  ++ +REGMA+ H+++F+ L+EK 
Sbjct: 26  NLEMPFLKSSLIWKNIESLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKM 85

Query: 303 SKLQFSDSSSTMESYLQTLANLEKHGFDVDPVRSCLMLLLTNKKSKEKLEEQYKQIRNEI 124
           SKLQ  D     ESY++ LA LE HGF+V  +   L  LL+ K   ++LE++ K++   +
Sbjct: 86  SKLQVDDGREVFESYMEVLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKVHIGM 145

Query: 123 TSNEREKDELDQAILQMNQQIKDLAEKLSVAESRKAKKNEE 1
              + EK +L++ I ++ ++I+ L E+ ++  S K  K+ E
Sbjct: 146 AEGKNEKIKLEEDIDKIEKRIRQLEEQRAMKVSMKMMKDSE 186


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